RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 SRP14P37108 136 aaKnown RBP10.67□□□□□ -0.7
PNKP-217ENST00000625216 DDOSTP39656 456 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 RORCP51449 518 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 TNFAIP6P98066 277 aaPredicted RBP10.67□□□□□ -0.7
PNKP-217ENST00000625216 FAM3AP98173 230 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF404Q494X3 552 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF529Q6P280 563 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 SFXN4Q6P4A7 337 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 FBXW12Q6X9E4 464 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 PEG10Q86TG7 708 aaKnown RBP10.67□□□□□ -0.7
PNKP-217ENST00000625216 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 CCDC54Q8NEL0 328 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 DNAAF1Q8NEP3 725 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 TSC22D3Q99576 134 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 NARFLQ9H6Q4 476 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 PLEKHA1Q9HB21 404 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF391Q9UJN7 358 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 FOXJ3Q9UPW0 622 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 WIPI2Q9Y4P8 454 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 A0A075B6Q4 140 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 NOTOA8MTQ0 251 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 FAM157AC9JC47 383 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 PDCD5O14737 125 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 ATF1P18846 271 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 GNALP38405 381 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 GSK3AP49840 483 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 GK2Q14410 553 aaPredicted RBP10.66□□□□□ -0.7
PNKP-217ENST00000625216 OR8B8Q15620 311 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 AVPI1Q5T686 147 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 OR5AS1Q8N127 324 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 OR6Q1Q8NGQ2 317 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 OR13C9Q8NGT0 318 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 NKX3-1Q99801 234 aaPredicted RBP10.66□□□□□ -0.7
PNKP-217ENST00000625216 ZCCHC4Q9H5U6 513 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 MSL2Q9HCI7 577 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 IL19Q9UHD0 177 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 PIGLQ9Y2B2 252 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 CACNG2Q9Y698 323 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 A3GALT2U3KPV4 340 aa10.66□□□□□ -0.7
PNKP-217ENST00000625216 CUBNO60494 3623 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 A0A0B4J203 849 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 DHRS7CA6NNS2 312 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 MTRF1O75570 445 aaKnown RBP10.65□□□□□ -0.7
PNKP-217ENST00000625216 IGHV2-5P01817 119 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 SELEP16581 610 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 HLXQ14774 488 aaPredicted RBP10.65□□□□□ -0.7
PNKP-217ENST00000625216 IDNKQ5T6J7 187 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 HES5Q5TA89 166 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.7
PNKP-217ENST00000625216 LYPD6Q86Y78 171 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 SEMA6DQ8NFY4 1073 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 OR2Z1Q8NG97 314 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 OR1M1Q8NGA1 313 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 OR56B2PQ8NGI1 322 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 REPIN1Q9BWE0 567 aaKnown RBP10.65□□□□□ -0.7
PNKP-217ENST00000625216 CHST5Q9GZS9 411 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 C6orf62Q9GZU0 229 aaPredicted RBP10.65□□□□□ -0.7
PNKP-217ENST00000625216 MMP27Q9H306 513 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 CKLFQ9UBR5 152 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 DAPK2Q9UIK4 370 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 RHBDD3Q9Y3P4 386 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 V9GY05 133 aa10.65□□□□□ -0.7
PNKP-217ENST00000625216 IGKV1-9A0A0C4DH69 117 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 ANXA2P2A6NMY6 339 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 CTDSP2O14595 271 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 SULT1B1O43704 296 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 CFL1P23528 166 aaKnown RBP10.64□□□□□ -0.71
PNKP-217ENST00000625216 GATA3P23771 443 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 MAP2K3P46734 347 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 PPP3R1P63098 170 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 MALLQ13021 153 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 TMEM42Q69YG0 159 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 Q6ZR03 302 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 UTS2BQ765I0 119 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 RNF144BQ7Z419 303 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 OR13G1Q8NGZ3 307 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 C10orf35Q96D05 121 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 GAL3ST1Q99999 423 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 MIXL1Q9H2W2 232 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 OPA3Q9H6K4 179 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 PPP1R3EQ9H7J1 279 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 LPAR2Q9HBW0 351 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 GPR173Q9NS66 373 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 TMEM106BQ9NUM4 274 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 NPTNQ9Y639 398 aa10.64□□□□□ -0.71
PNKP-217ENST00000625216 IFITM5A6NNB3 132 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 IQCF6A8MYZ5 107 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 J3QLI3 93 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 AIPO00170 330 aa10.63□□□□□ -0.71
PNKP-217ENST00000625216 PAHP00439 452 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms