RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZNF75AQ96N20 296 aa14.12□□□□□ -0.15
LDB3-208ENST00000623007 TAAR6Q96RI8 345 aa14.12□□□□□ -0.15
LDB3-208ENST00000623007 GON7Q9BXV9 100 aa14.12□□□□□ -0.15
LDB3-208ENST00000623007 SLA2Q9H6Q3 261 aa14.12□□□□□ -0.15
LDB3-208ENST00000623007 POU2F3Q9UKI9 436 aa14.12□□□□□ -0.15
LDB3-208ENST00000623007 PQLC2LA1A4F0 135 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 CD300LBA8K4G0 201 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 ZNF850A8MQ14 1090 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 SSX5O60225 188 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 RGS11O94810 467 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 ZNF14P17017 642 aaPredicted RBP14.11□□□□□ -0.15
LDB3-208ENST00000623007 RAD52P43351 418 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 NHLRC3Q5JS37 347 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 FAM180AQ6UWF9 173 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 ZNF573Q86YE8 665 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 OR51F2Q8NH61 342 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 ZNF431Q8TF32 576 aaPredicted RBP14.11□□□□□ -0.15
LDB3-208ENST00000623007 BEX2Q9BXY8 128 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 TINAGL1Q9GZM7 467 aaPredicted RBP14.11□□□□□ -0.15
LDB3-208ENST00000623007 DKK4Q9UBT3 224 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 STARD10Q9Y365 291 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 WDFY3Q8IZQ1 3526 aa14.11□□□□□ -0.15
LDB3-208ENST00000623007 TNRC6AQ8NDV7 1962 aaKnown RBP14.11□□□□□ -0.15
LDB3-208ENST00000623007 CEACAM18A8MTB9 384 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 M0QYG6 137 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 HPXP02790 462 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 AMY2BP19961 511 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 ANXA7P20073 488 aaKnown RBP14.1□□□□□ -0.15
LDB3-208ENST00000623007 HRH1P35367 487 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 TIMP3P35625 211 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 OR3A3P47888 321 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 UCNP55089 124 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 FOXC1Q12948 553 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 SURF2Q15527 256 aaPredicted RBP14.1□□□□□ -0.15
LDB3-208ENST00000623007 GRK1Q15835 563 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
LDB3-208ENST00000623007 SCGB2B2Q4G0G5 96 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 C4orf46Q504U0 113 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 ZNF585AQ6P3V2 769 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 SEZ6L2Q6UXD5 910 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 C9orf106Q8NAJ2 232 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 WBP1Q96G27 269 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 A0A1W2PP11 408 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 ZNF503-AS2A6NEH8 195 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 FABP7O15540 132 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 RRP8O43159 456 aaKnown RBP14.1□□□□□ -0.15
LDB3-208ENST00000623007 MPV17LQ2QL34 196 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 C3P1Q6ZMU1 363 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 RNF144BQ7Z419 303 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 ZNF611Q8N823 705 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 BEST4Q8NFU0 473 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 TERB2Q8NHR7 220 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 CAPSLQ8WWF8 208 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 SLC6A7Q99884 636 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 USB1Q9BQ65 265 aaKnown RBP14.1□□□□□ -0.15
LDB3-208ENST00000623007 SPACA1Q9HBV2 294 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 MSRB2Q9Y3D2 182 aa14.1□□□□□ -0.15
LDB3-208ENST00000623007 IGKV1-27A0A075B6S5 117 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 POM121CA8CG34 1229 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 RAD51DO75771 328 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 OR2A4O95047 310 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 IL2RAP01589 272 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 IGKV3-15P01624 115 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 OR4E1P0C645 316 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 RAC2P15153 192 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 GNG3P63215 75 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 C3orf36Q3SXR2 165 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 GCNT2Q8N0V5 402 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 RBMXL3Q8N7X1 1067 aaKnown RBP14.09□□□□□ -0.15
LDB3-208ENST00000623007 OR5AP2Q8NGF4 316 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 OR5M9Q8NGP3 310 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 GRPEL2Q8TAA5 225 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 OR2A7Q96R45 310 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 PKIBQ9C010 78 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 POFUT1Q9H488 388 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 MGAT4CQ9UBM8 478 aa14.09□□□□□ -0.15
LDB3-208ENST00000623007 PDCD6O75340 191 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 GABRR1P24046 479 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 NKX2-5P52952 324 aaPredicted RBP14.08□□□□□ -0.16
LDB3-208ENST00000623007 SNU13P55769 128 aaKnown RBP14.08□□□□□ -0.16
LDB3-208ENST00000623007 RBM11P57052 281 aaKnown RBP14.08□□□□□ -0.16
LDB3-208ENST00000623007 TSPAN5P62079 268 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.16
LDB3-208ENST00000623007 CHRFAM7AQ494W8 412 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 C1orf185Q5T7R7 199 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 LIN54Q6MZP7 749 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 C11orf88Q6PI97 169 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 SSX8Q7RTT4 187 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 CD163Q86VB7 1156 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 Q8IYB0 196 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 OR4S1Q8NGB4 309 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 OR10K1Q8NGX5 313 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 OR5P3Q8WZ94 311 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 EMG1Q92979 244 aaKnown RBP14.08□□□□□ -0.16
LDB3-208ENST00000623007 DHRS9Q9BPW9 319 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 SEC22CQ9BRL7 303 aa14.08□□□□□ -0.16
LDB3-208ENST00000623007 BCL2L14Q9BZR8 327 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms