RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 MITD1Q8WV92 249 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
MSH6-215ENST00000622629 CACNA1HO95180 2353 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 E5RGE8 158 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 H3BP45 60 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
MSH6-215ENST00000622629 WDR1O75083 606 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 TUSC2O75896 110 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 TIAF1O95411 115 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 ACER2Q5QJU3 275 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 PRRX2Q99811 253 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 MESP1Q9BRJ9 268 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 DNAJB11Q9UBS4 358 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 ZNF816-ZNF321PA0A0X1KG74 233 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 SSSCA1O60232 199 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 IFNA1P01562 189 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 HLA-HP01893 362 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 GCH1P30793 250 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 KIR2DS4P43632 304 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 UBE2KP61086 200 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 ST7LQ8TDW4 575 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 KCNE4Q8WWG9 221 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 SMCO4Q9NRQ5 59 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 WDR87Q6ZQQ6 2873 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 AQP7P3A6NL99 342 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 RAB35Q15286 201 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 SPATA46Q5T0L3 261 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 PECRQ9BY49 303 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 MASP2O00187 686 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 GPR31O00270 319 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 FSTP19883 344 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 C2orf68Q2NKX9 166 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 SLC30A7Q8NEW0 376 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 HDHD3Q9BSH5 251 aaPredicted RBP11.32□□□□□ -0.6
MSH6-215ENST00000622629 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
MSH6-215ENST00000622629 PI4KAP42356 2102 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 FIGNL2A6NMB9 653 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 DEGS1O15121 323 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 CST7O76096 145 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 FUT3P21217 361 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 GPM6AP51674 278 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 PABPC1L2AQ5JQF8 200 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 OR56B2PQ8NGI1 322 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 OR10J5Q8NHC4 309 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 ZNF732B4DXR9 585 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 FUT6P51993 359 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 ARF1P84077 181 aaKnown RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 ZP4Q12836 540 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 GGNBP1Q5YKI7 109 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 HAS2Q92819 552 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 FGF11Q92914 225 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 EXTL1Q92935 676 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 S100PBPQ96BU1 408 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 PURGQ9UJV8 347 aaKnown RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 IFNA17P01571 189 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 FAM157BP0CG42 384 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 CD37P11049 281 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 MST1P26927 711 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 LSM6P62312 80 aaKnown RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 PRSS54Q6PEW0 395 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 CLRN3Q8NCR9 226 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 OR2Y1Q8NGV0 311 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 SDSLQ96GA7 329 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 RAB33BQ9H082 229 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 LPAR5Q9H1C0 372 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 CLDN1O95832 211 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 F2RL1P55085 397 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 MAJINQ3KP22 176 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 GFI1Q99684 422 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 WDR13Q9H1Z4 485 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 AKIRIN1Q9H9L7 192 aaPredicted RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
MSH6-215ENST00000622629 HELZP42694 1942 aaKnown RBP11.31□□□□□ -0.6
MSH6-215ENST00000622629 OR5AC1P0C628 307 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 G0S2P27469 103 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 LIMK1P53667 647 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 RAC3P60763 192 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 COTL1Q14019 142 aa11.3□□□□□ -0.6
MSH6-215ENST00000622629 HAGHQ16775 308 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms