RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	UNKL	Q9H9P5	680 aa	Known RBP	12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	MMACHC	Q9Y4U1	282 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	C2orf16	Q68DN1	1984 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	PCNX3	Q9H6A9	2034 aa		12.68	□□□□□ -0.38
SYNRG-231	ENST00000622045	CDRT15L2	A8MXV6	281 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	TSTD3	H0UI37	97 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	IGKV3-11	P04433	115 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	DANCR	P0C864	163 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	JMJD7	P0C870	316 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST1H1D	P16402	221 aa	Known RBP	12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	TAS2R60	P59551	318 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	FAM3A	P98173	230 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	IL15RA	Q13261	267 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	C21orf62-AS1	Q17RA5	79 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	GGNBP1	Q5YKI7	109 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045		Q7L0L9	218 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	PEG10	Q86TG7	708 aa	Known RBP	12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	KCNG3	Q8TAE7	436 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	RNF133	Q8WVZ7	376 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	S100A13	Q99584	98 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	WWTR1	Q9GZV5	400 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF700	Q9H0M5	742 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	C14orf166	Q9Y224	244 aa	Known RBP	12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	B3GALT5	Q9Y2C3	310 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF587B	E7ETH6	402 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	CARD17	Q5XLA6	110 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	PBDC1	Q9BVG4	233 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045		H3BQ15	152 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	NPIPB7	O75200	414 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	SRSF10	O75494	262 aa	Known RBP	12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	IGHV4-34	P06331	123 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	G0S2	P27469	103 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	NHLH2	Q02577	135 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	PCK2	Q16822	640 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	LYPD6	Q86Y78	171 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	OR51T1	Q8NGJ9	327 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	URM1	Q9BTM9	101 aa	Known RBP	12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	SUSD2	Q9UGT4	822 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	WASF3	Q9UPY6	502 aa		12.67	□□□□□ -0.38
SYNRG-231	ENST00000622045	MS4A18	H0YCH9	400 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	TSPAN2	O60636	221 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	RPS2	P15880	293 aa	Known RBP	12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	ERVFRD-1	P60508	538 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	MS4A18	Q3C1V0	323 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	C7orf61	Q8IZ16	206 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	ASB10	Q8WXI3	467 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	ATG101	Q9BSB4	218 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	BORCS7-ASMT	A0A0B4J1R7	106 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	IGHV3-20	A0A0C4DH32	117 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	SEC14L6	B5MCN3	397 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	DEDD	O75618	318 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	RAB1A	P62820	205 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	CHAF1B	Q13112	559 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	CHRFAM7A	Q494W8	412 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	P4HA3	Q7Z4N8	544 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	RLN3	Q8WXF3	142 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	MED12	Q93074	2177 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	SHISA8	B8ZZ34	492 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	SLC33A1	O00400	549 aa	Predicted RBP	12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	TCAP	O15273	167 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	IFNA21	P01568	189 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	C17orf78	Q8N4C9	275 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	NAXE	Q8NCW5	288 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	LYPD6B	Q8NI32	183 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	TOMM40L	Q969M1	308 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	FAM206A	Q9NX38	181 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	SLCO1B1	Q9Y6L6	691 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	UNC13C	Q8NB66	2214 aa		12.66	□□□□□ -0.38
SYNRG-231	ENST00000622045	GAPDH	P04406	335 aa	Known RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	GSTP1	P09211	210 aa	Known RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	FOXL2	P58012	376 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	VAX1	Q5SQQ9	334 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	TSPO2	Q5TGU0	170 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF385C	Q66K41	422 aa	Predicted RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	C1QL4	Q86Z23	238 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	C1orf123	Q9NWV4	160 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	ASXL3	Q9C0F0	2248 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045		A0A1W2PQD3	144 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	CLRN1	P58418	232 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	MRPS21	P82921	87 aa	Known RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	UBE2V2	Q15819	145 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	HIST3H2BB	Q8N257	126 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	GALNT14	Q96FL9	552 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	GPR84	Q9NQS5	396 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	TMEM14DP	A8MWL7	114 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	DRD1	P21728	446 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	CDA	P32320	146 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	PKIA	P61925	76 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	AKR1C8P	Q5T2L2	129 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZNF283	Q8N7M2	679 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	ZFP62	Q8NB50	900 aa	Predicted RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	CPNE4	Q96A23	557 aa	Predicted RBP	12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	SPAG17	Q6Q759	2223 aa		12.65	□□□□□ -0.38
SYNRG-231	ENST00000622045	CABIN1	Q9Y6J0	2220 aa		12.65	□□□□□ -0.39
SYNRG-231	ENST00000622045	OR5H15	A6NDH6	313 aa		12.64	□□□□□ -0.39
SYNRG-231	ENST00000622045	TLCD2	A6NGC4	264 aa		12.64	□□□□□ -0.39
SYNRG-231	ENST00000622045	OR5H1	A6NKK0	313 aa		12.64	□□□□□ -0.39
SYNRG-231	ENST00000622045	CDC14B	O60729	498 aa		12.64	□□□□□ -0.39
SYNRG-231	ENST00000622045	BTF3	P20290	206 aa	Known RBP	12.64	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms