RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 LYG1Q8N1E2 194 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ARHGEF39Q8N4T4 335 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 OR5H6Q8NGV6 325 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 FAM213BQ8TBF2 198 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 DYNC2LI1Q8TCX1 351 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 FYTTD1Q96QD9 318 aaKnown RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 GPA33Q99795 319 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 DLL4Q9NR61 685 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ZNF275Q9NSD4 429 aaPredicted RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 HIF1ANQ9NWT6 349 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 A0A0C4DFX4 3053 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 DNPH1O43598 174 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 KRASP01116 189 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 CCL8P80075 99 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 TLE1Q04724 770 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 LYSMD2Q8IV50 215 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ZFP62Q8NB50 900 aaPredicted RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 ANGPTL4Q9BY76 406 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 TGIF2Q9GZN2 237 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 POFUT1Q9H488 388 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 MRM2Q9UI43 246 aaKnown RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 COPS3Q9UNS2 423 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 SERPINE3A8MV23 424 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 FADS1O60427 444 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 CD300CQ08708 224 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 XAF1Q6GPH4 301 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ZNF574Q6ZN55 896 aaPredicted RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 PCNPQ8WW12 178 aaKnown RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 ARHGAP5-AS1Q96IT6 56 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 FAAP24Q9BTP7 215 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 ERRFI1Q9UJM3 462 aaPredicted RBP8.16□□□□□ -1.1
GGA3-223ENST00000621870 AMDHD2Q9Y303 409 aa8.16□□□□□ -1.1
GGA3-223ENST00000621870 LRP5LA4QPB2 252 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 OR5B21A6NL26 309 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 BGLAPP02818 100 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 SUB1P53999 127 aaKnown RBP eCLIP8.15□□□□□ -1.1
GGA3-223ENST00000621870 FOXO1Q12778 655 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 C6orf201Q7Z4U5 140 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 MDP1Q86V88 176 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 LILRB4Q8NHJ6 448 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 SLC25A40Q8TBP6 338 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 RPEQ96AT9 228 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 SBF1O95248 1867 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 KIF13BQ9NQT8 1826 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 ARPC4-TTLL3A0A0A6YYG9 625 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 PLPP2O43688 288 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 CT45A6P0DMU7 189 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 CT45A5P0DMU8 189 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 CT45A7P0DMV0 189 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 SMIM10L1P0DMW3 83 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 NAT2P11245 290 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 IL11P20809 199 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 AADACP22760 399 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 PIGPP57054 158 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 CT45A1Q5HYN5 189 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 C1orf185Q5T7R7 199 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 STUMQ69YW2 141 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 ZNF529Q6P280 563 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 MOGAT3Q86VF5 341 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 CT45A3Q8NHU0 189 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 SMIM10Q96HG1 83 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 MS4A3Q96HJ5 214 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 OR2J1Q9GZK6 312 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 OPN3Q9H1Y3 402 aaPredicted RBP8.15□□□□□ -1.1
GGA3-223ENST00000621870 TMEM38BQ9NVV0 291 aa8.15□□□□□ -1.1
GGA3-223ENST00000621870 FER1L5A0AVI2 2057 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 IGHV3-43A0A0B4J1X8 118 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 TRAV1-2A0A0B4J238 106 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 AHRRA9YTQ3 701 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 IGHV3-43DP0DP04 118 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 MVDP53602 400 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.11
GGA3-223ENST00000621870 PRSS53Q2L4Q9 553 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 ADAM5Q6NVV9 412 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 THNSL2Q86YJ6 484 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 C17orf78Q8N4C9 275 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 OR6S1Q8NH40 331 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 TNFRSF19Q9NS68 423 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 FLVCR2Q9UPI3 526 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 FOXJ3Q9UPW0 622 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 MPC1Q9Y5U8 109 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 OTOFQ9HC10 1997 aa8.15□□□□□ -1.11
GGA3-223ENST00000621870 TCF20Q9UGU0 1960 aaKnown RBP8.15□□□□□ -1.11
GGA3-223ENST00000621870 FAM157AC9JC47 383 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 H3BP45 60 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 GPR37O15354 613 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 CRYBA1P05813 215 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 OR8U8P0C7N1 319 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 NME2P22392 152 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 DYRK1AQ13627 763 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 MRGPRDQ8TDS7 321 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 LRFN3Q9BTN0 628 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 OR2H1Q9GZK4 316 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 ZNF230Q9UIE0 474 aaPredicted RBP8.14□□□□□ -1.11
GGA3-223ENST00000621870 IGF2RP11717 2491 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 HEATR1Q9H583 2144 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms