RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 GOSR2O14653 212 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ARL6IP1Q15041 203 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ZNF718Q3SXZ3 478 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 OSR2Q8N2R0 312 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ZNF488Q96MN9 340 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 MOV10Q9HCE1 1003 aaKnown RBP13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ASF1BQ9NVP2 202 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 COQ3Q9NZJ6 369 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SPG11Q96JI7 2443 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 TERTO14746 1132 aaKnown RBP13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SLC9A3R2Q15599 337 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 OLFML2AQ68BL7 652 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 C1QL2Q7Z5L3 287 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 DEFB108BQ8NET1 73 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 TMEM45BQ96B21 275 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 PRRT1Q99946 306 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 H7C417 338 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SIRPB1O00241 398 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 AKR7A2O43488 359 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SLC22A5O76082 557 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 HLA-AP01891 365 aaKnown RBP13.64□□□□□ -0.23
CPSF1-213ENST00000620219 METTL11BQ5VVY1 283 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-213ENST00000620219 PCNPQ8WW12 178 aaKnown RBP13.64□□□□□ -0.23
CPSF1-213ENST00000620219 DYRK2Q92630 601 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 MTFP1Q9UDX5 166 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 E9PLN8 166 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 DYRK1AQ13627 763 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 C1orf185Q5T7R7 199 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ASPHD2Q6ICH7 369 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SCMH1Q96GD3 660 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 RTL8AQ9BWD3 113 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 ZDHHC11Q9H8X9 412 aa13.64□□□□□ -0.23
CPSF1-213ENST00000620219 SCGB1D2O95969 90 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 SFTPBP07988 381 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 NUP62P37198 522 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-213ENST00000620219 IL13RA1P78552 427 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 MEF2DQ14814 521 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 HIST3H3Q16695 136 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 ADAT1Q9BUB4 502 aaKnown RBP13.63□□□□□ -0.23
CPSF1-213ENST00000620219 AQP7O14520 342 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 FSTP19883 344 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 ID4P47928 161 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 ACSF3Q4G176 576 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-213ENST00000620219 RTN4RL2Q86UN3 420 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 SPRY3O43610 288 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 IGFBP7Q16270 282 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 RHOUQ7L0Q8 258 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 CITED4Q96RK1 184 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 SYT3Q9BQG1 590 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 LOC400499M0QZD8 3231 aa13.63□□□□□ -0.23
CPSF1-213ENST00000620219 GEMIN2O14893 280 aaKnown RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 IGHV1-2P23083 117 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 FAM3AP98173 230 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 ZSCAN4Q8NAM6 433 aaPredicted RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 GALNT11Q8NCW6 608 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 LYZL4Q96KX0 146 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 ATP23Q9Y6H3 246 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 SLC34A2O95436 690 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 PDGFAP04085 211 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 CD34P28906 385 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 RGS7BPQ6MZT1 257 aaPredicted RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 OR2Z1Q8NG97 314 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 SEC22AQ96IW7 307 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 SCGB3A2Q96PL1 93 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 TREM2Q9NZC2 230 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 HIST1H1DP16402 221 aaKnown RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 DYNLRB1Q9NP97 96 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 PNRC2Q9NPJ4 139 aaKnown RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 ANKRD20A5PA0PJZ0 165 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 GSTT2P0CG29 244 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 RBMXP38159 391 aaKnown RBP13.62□□□□□ -0.23
CPSF1-213ENST00000620219 S100A10P60903 97 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 EDDM3AQ14507 147 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 ZNF573Q86YE8 665 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 RPRMLQ8N4K4 120 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 OR6K3Q8NGY3 331 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 SEH1LQ96EE3 360 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 LINC00470Q9BZP3 86 aa13.62□□□□□ -0.23
CPSF1-213ENST00000620219 USF3Q68DE3 2245 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 SELEP16581 610 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 S100GP29377 79 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 DLX5P56178 289 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 PAN3Q58A45 887 aaKnown RBP13.61□□□□□ -0.23
CPSF1-213ENST00000620219 HDHD3Q9BSH5 251 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-213ENST00000620219 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 GLS2Q9UI32 602 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 ZNF391Q9UJN7 358 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 KIAA2026Q5HYC2 2103 aa13.61□□□□□ -0.23
CPSF1-213ENST00000620219 CCSO14618 274 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms