RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 BRD7Q9NPI1 651 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 SLCO1C1Q9NYB5 712 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 NKIRAS2Q9NYR9 191 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ASH2LQ9UBL3 628 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 KIF25Q9UIL4 384 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 KCNG2Q9UJ96 466 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 GDF2Q9UK05 429 aaPredicted RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 ELF5Q9UKW6 265 aaPredicted RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 RBMX2Q9Y388 322 aaKnown RBP4.5□□□□□ -1.69
SHMT1-211ENST00000618902 HSPB11Q9Y547 144 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 MAB21L2Q9Y586 359 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 AUP1Q9Y679 476 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 U3KQ87 197 aa4.5□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0G2JK05 382 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 LINC00854A0A1B0GVQ3 168 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 UBE2QL1A1L167 161 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 IFNL4K9M1U5 179 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF593O00488 134 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 BET1O15155 118 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 MAGEB4O15481 346 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 XRCC3O43542 346 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SGCEO43556 437 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DOK2O60496 412 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CREBL2O60519 120 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 NDUFS7O75251 213 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF254O75437 659 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SLC22A5O76082 557 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR2A4O95047 310 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 APOL3O95236 402 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 MRPL3P09001 348 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CSF1P09603 554 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 GIPP09681 153 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CD37P11049 281 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF250P15622 560 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 GIFP27352 417 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 THBS4P35443 961 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 NAA10P41227 235 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 HTR2BP41595 481 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 GSK3AP49840 483 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 NKX2-5P52952 324 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 P2RX3P56373 397 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM33P57088 247 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DHODHQ02127 395 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 GLO1Q04760 184 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SLC3A1Q07837 685 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 LOXL1Q08397 574 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 FGL1Q08830 312 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ECH1Q13011 328 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SCGB2A2Q13296 93 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ALKBH1Q13686 389 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DOC2BQ14184 412 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ADIPOQQ15848 244 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CLEC12BQ2HXU8 276 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 TBC1D28Q2M2D7 210 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ALKBH6Q3KRA9 238 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 TEX30Q5JUR7 227 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF684Q5T5D7 378 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OLFML2AQ68BL7 652 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 KCTD18Q6PI47 426 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DEGS2Q6QHC5 323 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 VHLLQ6RSH7 139 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SHFQ7M4L6 423 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DPY19L4Q7Z388 723 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 NAA40Q86UY6 237 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF680Q8NEM1 530 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR10H5Q8NGA6 315 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR5AK2Q8NH90 309 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR1F12Q8NHA8 337 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CCDC107Q8WV48 283 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 GTF3AQ92664 365 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 PHF21AQ96BD5 680 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 PELI1Q96FA3 418 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR2A7Q96R45 310 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ABHD6Q9BV23 337 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF436Q9C0F3 470 aaPredicted RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 OR51B6Q9H340 312 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ELOVL3Q9HB03 270 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SCPEP1Q9HB40 452 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 MYEF2Q9P2K5 600 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 EIF3KQ9UBQ5 218 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 LPAR3Q9UBY5 353 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 UBQLN2Q9UHD9 624 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 FZR1Q9UM11 496 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 MGAT4AQ9UM21 535 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 COPS3Q9UNS2 423 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 FOXJ3Q9UPW0 622 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 NOP16Q9Y3C1 178 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 TIMM10BQ9Y5J6 103 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 ATP23Q9Y6H3 246 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 SESN1Q9Y6P5 492 aa4.49□□□□□ -1.69
SHMT1-211ENST00000618902 CHD3Q12873 2000 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 FN1P02751 2386 aaKnown RBP4.49□□□□□ -1.69
SHMT1-211ENST00000618902 DNHD1Q96M86 4753 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 IGLV3-9A0A075B6K5 115 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0B4J293 547 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 TRBV5-5A0A0J9YX44 114 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 SHISA3A0PJX4 238 aa4.48□□□□□ -1.69
SHMT1-211ENST00000618902 ANKRD20A5PA0PJZ0 165 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms