RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DHRS7CA6NNS2 312 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 LEUTXA8MZ59 168 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 H7C1C5 153 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 CDC42EP2O14613 210 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 IGHG4P01861 327 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SNRNP70P08621 437 aaKnown RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 HCKP08631 526 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SELLP14151 372 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SLC6A6P31641 620 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 LUMP51884 338 aaPredicted RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 LCN6P62502 163 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SELENOWP63302 87 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PAX5Q02548 391 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 TPTE2P1Q5T6R2 138 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 FAM27D1Q5T7N8 215 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 TEX38Q6PEX7 206 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 C8orf86Q6ZUL3 223 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 TCF23Q7RTU1 214 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SLC16A9Q7RTY1 509 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 NRMQ8IXM6 262 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR6V1Q8N148 313 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR9I1Q8NGQ6 314 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR2K2Q8NGT1 345 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SLC26A7Q8TE54 656 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 SGK3Q96BR1 496 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 REEP6Q96HR9 211 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PPP1R36Q96LQ0 422 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 ZNF714Q96N38 554 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR8B4Q96RC9 309 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR52B2Q96RD2 323 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 ASCL2Q99929 193 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 LINC00574Q9H8X3 128 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 RHOFQ9HBH0 211 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 DPM3Q9P2X0 92 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 ADAM18Q9Y3Q7 739 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 A0A087WUU8 490 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 A0A0U1RQV5 110 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 CDIPTO14735 213 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 ZNF682O95780 498 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 GLRA1P23415 457 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 POU1F1P28069 291 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 RAB7AP51149 207 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 CSNK2BP67870 215 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PRDX4Q13162 271 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PIN1Q13526 163 aaPredicted RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 ZNF273Q14593 569 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PLA1AQ53H76 456 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 AGBL2Q5U5Z8 902 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 NANOGP8Q6NSW7 305 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 FOXRED2Q8IWF2 684 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 STPG2Q8N412 459 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 Q8N6K4 173 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 C8orf31Q8N9H6 132 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 OR10A7Q8NGE5 316 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 RNF133Q8WVZ7 376 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 TSEN15Q8WW01 171 aaKnown RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 NOL4LQ96MY1 436 aaPredicted RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 SIKE1Q9BRV8 207 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 NMNAT2Q9BZQ4 307 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 PAPOLBQ9NRJ5 636 aaKnown RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 RHCGQ9UBD6 479 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 RPS6KA6Q9UK32 745 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 POLDIP2Q9Y2S7 368 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 AMMECR1Q9Y4X0 333 aaPredicted RBP3.58□□□□□ -1.84
SNCA-213ENST00000618500 hADV38S2A0JD32 116 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 UNC119BA6NIH7 251 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 BBIP1A8MTZ0 92 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 F5H5K5 113 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 J3QT63 122 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ZNF737O75373 536 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 IGF1P05019 195 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 FAM106CPP0CH98 169 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 AQP1P29972 269 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 PRDX2P32119 198 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 HOXA4Q00056 320 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 ZNF260Q3ZCT1 412 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CYBRD1Q53TN4 286 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CXorf66Q5JRM2 361 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 TMEM42Q69YG0 159 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR8H3Q8N146 312 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CCDC54Q8NEL0 328 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 TMEM185AQ8NFB2 350 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 OR8H1Q8NGG4 311 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 SNX22Q96L94 193 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 LIN7CQ9NUP9 197 aaKnown RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 BAIAP2Q9UQB8 552 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 AP4M1O00189 453 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 FFAR1O14842 300 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 HSPA12AO43301 675 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 LPLP06858 475 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 GSTP1P09211 210 aaKnown RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 OPRL1P41146 370 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 CX3CR1P49238 355 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 SLC7A2P52569 658 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 DLX1P56177 255 aa3.57□□□□□ -1.84
SNCA-213ENST00000618500 ELF3P78545 371 aaPredicted RBP3.57□□□□□ -1.84
SNCA-213ENST00000618500 IL24Q13007 206 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms