RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 FAM230AA0A1W2PPH8 454 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 OR2AT4A6NND4 320 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 NDUFB3O43676 98 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 PPIAL4GP0DN37 164 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 AMY2BP19961 511 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 FPR2P25090 351 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 GABRA2P47869 451 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 HILS1P60008 231 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 IL13RA1P78552 427 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 SMIM21Q3B7S5 101 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 LRRC10Q5BKY1 277 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-228ENST00000618469 TMEM244Q5VVB8 128 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 TTC23Q5W5X9 447 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 FDX2Q6P4F2 183 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF788Q6ZQV5 615 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 BATF2Q8N1L9 274 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 SYS1Q8N2H4 156 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 DHRSXQ8N5I4 330 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 POC1AQ8NBT0 407 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 SETD9Q8NE22 299 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-228ENST00000618469 MYCBPQ99417 103 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-228ENST00000618469 DNTTIP1Q9H147 329 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 ISG20L2Q9H9L3 353 aaKnown RBP13.23□□□□□ -0.29
BRCA1-228ENST00000618469 SLC7A11Q9UPY5 501 aa13.23□□□□□ -0.29
BRCA1-228ENST00000618469 ERICH4A6NGS2 130 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF879B4DU55 563 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 CASQ2O14958 399 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ECDO95905 644 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 PLATP00750 562 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 SFTPBP07988 381 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 PGA5P0DJD9 388 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF20P17024 532 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 CCR9P51686 369 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ALKBH1Q13686 389 aaKnown RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 CNN3Q15417 329 aaKnown RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 UBE2V2Q15819 145 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 KLHL22Q53GT1 634 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ATPAF1Q5TC12 328 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 METTL11BQ5VVY1 283 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 USP43Q70EL4 1123 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 CALHM1Q8IU99 346 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF676Q8N7Q3 588 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 OR10AC1Q8NH08 325 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 H1FXQ92522 213 aaKnown RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ADAT3Q96EY9 351 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 MS4A7Q9GZW8 240 aaPredicted RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 MRPS18AQ9NVS2 196 aaKnown RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 RPUSD1Q9UJJ7 312 aaKnown RBP13.22□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF222Q9UK12 451 aa13.22□□□□□ -0.29
BRCA1-228ENST00000618469 IGKV1D-17A0A075B6S4 117 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 SIGLEC5O15389 551 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 TOX4O94842 621 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 NXPH2O95156 264 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 SERPINA3P01011 423 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ISG15P05161 165 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 LIPFP07098 398 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 PSG2P11465 335 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 MPZP25189 248 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 TGM4P49221 684 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ADARB1P78563 741 aaKnown RBP13.21□□□□□ -0.29
BRCA1-228ENST00000618469 DGUOKQ16854 277 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 C11orf91Q3C1V1 193 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ACP7Q6ZNF0 438 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ANGPTL5Q86XS5 388 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-228ENST00000618469 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 OR51A4Q8NGJ6 313 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 OR13C3Q8NGS6 347 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 PP6455Q8WZ26 134 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 BORCS8Q96FH0 119 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 JMJD8Q96S16 334 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ZNF649Q9BS31 505 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 PKIBQ9C010 78 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 VCXQ9H320 206 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 ONECUT1Q9UBC0 465 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 SLC25A10Q9UBX3 287 aaPredicted RBP13.21□□□□□ -0.29
BRCA1-228ENST00000618469 HHLA2Q9UM44 414 aa13.21□□□□□ -0.29
BRCA1-228ENST00000618469 IGKV1-27A0A075B6S5 117 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 ACAA1P09110 424 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-228ENST00000618469 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 MMP9P14780 707 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 NDUFB7P17568 137 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 CAPGP40121 348 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
BRCA1-228ENST00000618469 IL18R1Q13478 541 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 GPR157Q5UAW9 335 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 RBMS3Q6XE24 437 aaKnown RBP13.2□□□□□ -0.3
BRCA1-228ENST00000618469 BRD3OSQ6XYD6 125 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 FGGYQ96C11 551 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 MED30Q96HR3 178 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 WDFY2Q96P53 400 aa13.2□□□□□ -0.3
BRCA1-228ENST00000618469 TBX15Q96SF7 602 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms