RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SLC6A7Q99884 636 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 C1QTNF6Q9BXI9 259 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 MED9Q9NWA0 146 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 TRAV17A0A0B4J275 112 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 hCG_38984A0A1B0GV85 526 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 OR14I1A6ND48 311 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 RFPL4AA6NLU0 287 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 RFPL4AL1F8VTS6 287 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 CRTAPO75718 401 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-209ENST00000617930 RPA2P15927 270 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 NUP62P37198 522 aaPredicted RBP15.16■□□□□ 0.02
CNOT3-209ENST00000617930 TMEM42Q69YG0 159 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 IGFL3Q6UXB1 125 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 COLCA1Q6ZS62 124 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 FAM89BQ8N5H3 189 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 RBMXL3Q8N7X1 1067 aaKnown RBP15.16■□□□□ 0.02
CNOT3-209ENST00000617930 C10orf35Q96D05 121 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 LINC00052Q96N35 136 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 TMEM59Q9BXS4 323 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 DISC1C4P0D8 188 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 CSN2P05814 226 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 GSK3AP49840 483 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 BAMBIQ13145 260 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 RNPS1Q15287 305 aaKnown RBP15.16■□□□□ 0.02
CNOT3-209ENST00000617930 OR13C8Q8NGS7 320 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 ARHGAP5-AS1Q96IT6 56 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 NUDT16L1Q9BRJ7 211 aaKnown RBP15.16■□□□□ 0.02
CNOT3-209ENST00000617930 C1QTNF5Q9BXJ0 243 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 PPA2Q9H2U2 334 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 C12orf49Q9H741 205 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 CRIM1Q9NZV1 1036 aa15.16■□□□□ 0.02
CNOT3-209ENST00000617930 DHRS7CA6NNS2 312 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 SPDEFO95238 335 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 FARS2O95363 451 aaKnown RBP15.15■□□□□ 0.02
CNOT3-209ENST00000617930 IL18BPO95998 194 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 RPS27AP62979 156 aaKnown RBP15.15■□□□□ 0.02
CNOT3-209ENST00000617930 SPERTQ8NA61 448 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF581Q9P0T4 197 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF107Q9UII5 783 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-209ENST00000617930 MYO7BQ6PIF6 2116 aa15.15■□□□□ 0.02
CNOT3-209ENST00000617930 IGHG3P01860 377 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CHRM2P08172 466 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 HIST1H1DP16402 221 aaKnown RBP15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CD34P28906 385 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 AGTR1P30556 359 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CALCRP30988 508 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 MEF2DQ14814 521 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 NKPD1Q17RQ9 610 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 ATPAF1Q5TC12 328 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-209ENST00000617930 SLC51BQ86UW2 128 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CD163Q86VB7 1156 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 PDZD9Q8IXQ8 264 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 LUZP4Q9P127 313 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 NOP16Q9Y3C1 178 aaKnown RBP15.14■□□□□ 0.01
CNOT3-209ENST00000617930 MFNGO00587 321 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 ANGPTL7O43827 346 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 MGMTP16455 207 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 SERPINA2P20848 420 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 OR8B8Q15620 311 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 STK11Q15831 433 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CLVS2Q5SYC1 327 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 LIN54Q6MZP7 749 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 Q6ZS92 163 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 CCDC54Q8NEL0 328 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 OR6K3Q8NGY3 331 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 SPSB4Q96A44 273 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 RAB3CQ96E17 227 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 PDCD10Q9BUL8 212 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 MYOZ1Q9NP98 299 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-209ENST00000617930 PIEZO2Q9H5I5 2752 aa15.14■□□□□ 0.01
CNOT3-209ENST00000617930 TRAV14DV4A0A0A6YYC5 116 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 SLC22A20A6NK97 555 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 K7ENP7 123 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 SPRY1O43609 319 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 HLA-AP01891 365 aaKnown RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 UBBP0CG47 229 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 MTCP1P56278 107 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 UBA52P62987 128 aaKnown RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 FGL1Q08830 312 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF169Q14929 603 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 RNASE10Q5GAN6 216 aaKnown RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 LY6G6FQ5SQ64 297 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF660Q6AZW8 331 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 INO80CQ6PI98 192 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-209ENST00000617930 ZNF100Q8IYN0 542 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 OR5M8Q8NGP6 311 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 PRDM14Q9GZV8 571 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 LHX6Q9UPM6 363 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 RAXQ9Y2V3 346 aa15.13■□□□□ 0.01
CNOT3-209ENST00000617930 IGKV1-12A0A0C4DH73 117 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 FAM230AA0A1W2PPH8 454 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 KRBOX1C9JBD0 128 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 IGKV1D-12P01611 117 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 MPGP29372 298 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 TAGLNQ01995 201 aaKnown RBP15.12■□□□□ 0.01
CNOT3-209ENST00000617930 DHRS2Q13268 280 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 HIKESHIQ53FT3 197 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 LPCAT3Q6P1A2 487 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 C17orf107Q6ZR85 190 aa15.12■□□□□ 0.01
CNOT3-209ENST00000617930 OVCH2Q7RTZ1 564 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms