RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ST6GALNAC5Q9BVH7 336 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 FGF23Q9GZV9 251 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 ALX4Q9H161 411 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 RANBP3Q9H6Z4 567 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 MGAT4AQ9UM21 535 aa14.95□□□□□ -0.02
PCDHGC3-205ENST00000617641 IFNA6P05013 189 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 CELA3BP08861 270 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 FOXC1Q12948 553 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 TSC22D1Q15714 1073 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 C2orf68Q2NKX9 166 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF585AQ6P3V2 769 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 WNT2BQ93097 391 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 RADILQ96JH8 1075 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 PLEKHJ1Q9NW61 149 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 HSPB11Q9Y547 144 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 MGAQ8IWI9 3026 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 DCHS1Q96JQ0 3298 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2AT4A6NND4 320 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 SERPINE3A8MV23 424 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 RGS13O14921 159 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 SFTPBP07988 381 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR4E1P0C645 316 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 CBX5P45973 191 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 TGFBR3Q03167 851 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 FOXF2Q12947 444 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 PIGYQ3MUY2 71 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 Q6ZS92 163 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 Q6ZT83 130 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 C9orf62Q8N4C0 152 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 ASCC1Q8N9N2 400 aaKnown RBP14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 BHLHE23Q8NDY6 225 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 PXT1Q8NFP0 134 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2T35Q8NGX2 323 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR51F2Q8NH61 342 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 GRPEL2Q8TAA5 225 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 CCDC107Q8WV48 283 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 HPSE2Q8WWQ2 592 aa14.94□□□□□ -0.02
PCDHGC3-205ENST00000617641 TPOP07202 933 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 AMY2BP19961 511 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZMYND11Q15326 602 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 BATF2Q8N1L9 274 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF611Q8N823 705 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF431Q8TF32 576 aaPredicted RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 WDR89Q96FK6 387 aaPredicted RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 PIPOXQ9P0Z9 390 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 LUZP4Q9P127 313 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 PQLC2LA1A4F0 135 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 FIGNL2A6NMB9 653 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 CD300LBA8K4G0 201 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 G3V3Q6 166 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF780AO75290 641 aaPredicted RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF14P17017 642 aaPredicted RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 DNASE1P24855 282 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 GPM6AP51674 278 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 UBE2NP61088 152 aaKnown RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 SLC25A26Q70HW3 274 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 HOGA1Q86XE5 327 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZDHHC23Q8IYP9 409 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 FBXL14Q8N1E6 418 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 OSR2Q8N2R0 312 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 RBMXL3Q8N7X1 1067 aaKnown RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 HDHD3Q9BSH5 251 aaPredicted RBP14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
PCDHGC3-205ENST00000617641 GEMIN2O14893 280 aaKnown RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 LILRA1O75019 489 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 TOXO94900 526 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 SIX6O95475 246 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 CST4P01036 141 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 IDH3GP51553 393 aaPredicted RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 SNU13P55769 128 aaKnown RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 GABRA6Q16445 453 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 SPATA46Q5T0L3 261 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 CSNK2A3Q8NEV1 391 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2AK2Q8NG84 335 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 FAAP24Q9BTP7 215 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 IL36GQ9NZH8 169 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 AHRRA9YTQ3 701 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 ARL6IP1Q15041 203 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 TBC1D28Q2M2D7 210 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 ACTBL2Q562R1 376 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR5H2Q8NGV7 314 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR6K3Q8NGY3 331 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 EMG1Q92979 244 aaKnown RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 OPA3Q9H6K4 179 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 FN3KRPQ9HA64 309 aa14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 MYOZ1Q9NP98 299 aaPredicted RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZNF701Q9NV72 531 aaPredicted RBP14.92□□□□□ -0.02
PCDHGC3-205ENST00000617641 SPTBN2O15020 2390 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 IL32P24001 234 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 NPBWR2P48146 333 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 CEACAM21Q3KPI0 293 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 VAX1Q5SQQ9 334 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 ZDHHC22Q8N966 263 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 LHX6Q9UPM6 363 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 ST3GAL6Q9Y274 331 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 GOSR2O14653 212 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 MSTNO14793 375 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 CA11O75493 328 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 GIPP09681 153 aaPredicted RBP14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 CHATP28329 748 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms