RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 GPR6P46095 362 aaPredicted RBP13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 GMFBP60983 142 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 PDZK1IP1Q13113 114 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 RIN1Q13671 783 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 TIMM50Q3ZCQ8 353 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 SHEQ5VZ18 495 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 GDPGP1Q6ZNW5 385 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 DNM1P46Q6ZS02 220 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 SLC25A26Q70HW3 274 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 KRTAP1-3Q8IUG1 177 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 C1orf87Q8N0U7 546 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 JAGN1Q8N5M9 183 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR10Z1Q8NGY1 313 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 CENPOQ9BU64 300 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 AK6Q9Y3D8 172 aaKnown RBP13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 NPTNQ9Y639 398 aa13.14□□□□□ -0.31
PCDHGC3-204ENST00000617222 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PRRC2AP48634 2157 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PPIAL4EA0A075B759 164 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 IGHV4-30-2A0A087WSY4 118 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 TRAV1-2A0A0B4J238 106 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PPIAL4DF5H284 164 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 ANGPTL7O43827 346 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PPIAL4FP0DN26 164 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 EGR1P18146 543 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 GIFP27352 417 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 IL24Q13007 206 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 AVPI1Q5T686 147 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 GLT8D1Q68CQ7 371 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 MKXQ8IYA7 352 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 BATF2Q8N1L9 274 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 C19orf18Q8NEA5 215 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 DEFB108BQ8NET1 73 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR51F2Q8NH61 342 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 TNFAIP8L1Q8WVP5 186 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 RAB1CQ92928 201 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 ZNF488Q96MN9 340 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 KCTD7Q96MP8 289 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 POLDIP2Q9Y2S7 368 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 PPIAL4AQ9Y536 164 aa13.13□□□□□ -0.31
PCDHGC3-204ENST00000617222 NDUFS8O00217 210 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 WNT9BO14905 357 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CYB5AP00167 134 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CD80P33681 288 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 OR3A4PP47883 348 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 ZP1P60852 638 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 SFRP4Q6FHJ7 346 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 ANKRD13BQ86YJ7 626 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CDH26Q8IXH8 852 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 NKAIN3Q8N8D7 197 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 SEH1LQ96EE3 360 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 Q96MF0 132 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 GFI1Q99684 422 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 BPESC1Q9GZL8 116 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 FAM192AQ9GZU8 254 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 WDR13Q9H1Z4 485 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CNTD2Q9H8S5 307 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 MTCH1Q9NZJ7 389 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CCDC168Q8NDH2 2452 aa13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 CHD3Q12873 2000 aaKnown RBP13.12□□□□□ -0.31
PCDHGC3-204ENST00000617222 DYSFO75923 2080 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 PDZD2O15018 2839 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 IGHV3OR15-7A0A075B7D8 119 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 SRRM5B3KS81 715 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 PDCD5O14737 125 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 NOS1APO75052 506 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 PGA5P0DJD9 388 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 GLRA1P23415 457 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 PTGFRP43088 359 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 NPBWR2P48146 333 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 MTNR1BP49286 362 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 BTG1P62324 171 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 ZMYND11Q15326 602 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 LYPD6Q86Y78 171 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 CLVS1Q8IUQ0 354 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 PNLDC1Q8NA58 520 aaKnown RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 ZSCAN4Q8NAM6 433 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 POC1AQ8NBT0 407 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 FOXRED1Q96CU9 486 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 ELL3Q9HB65 397 aaPredicted RBP13.11□□□□□ -0.31
PCDHGC3-204ENST00000617222 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
PCDHGC3-204ENST00000617222 ISPDA4D126 451 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms