RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SCGNO76038 276 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 P04436 131 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 ZNF84P51523 738 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 LSM6P62312 80 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 ECH1Q13011 328 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 JMJD6Q6NYC1 403 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 SSX9Q7RTT3 188 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
CACNA1C-231ENST00000616390 CCDC187A0A096LP49 1063 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 RNF222A6NCQ9 220 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM210A6NLX4 147 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 NDUFB7P17568 137 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 MLF1P58340 268 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 KCNMB1Q16558 191 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 OR2W3Q7Z3T1 314 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 HOGA1Q86XE5 327 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 C20orf196Q8IYI0 205 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 BHLHE23Q8NDY6 225 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 NARS2Q96I59 477 aaKnown RBP12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 METTL8Q9H825 291 aaKnown RBP12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 ACKR4Q9NPB9 350 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 CSAG2Q9Y5P2 127 aa12.15□□□□□ -0.47
CACNA1C-231ENST00000616390 A0A087WZY1 265 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 A0A0D9SG52 128 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 LCATP04180 440 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 GSTP1P09211 210 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 PGAM2P15259 253 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 PDCD1Q15116 288 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 M1APQ8TC57 530 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 PIGQQ9BRB3 760 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 MYOZ1Q9NP98 299 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 TNRC6BQ9UPQ9 1833 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 DUS4LO95620 317 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 NR2C1P13056 603 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 CCL1P22362 96 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 MTCP1P56278 107 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 RPS27AP62979 156 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 MC2RQ01718 297 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 SRYQ05066 204 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 Q0VFX4 171 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 C9orf135Q5VTT2 229 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 CRIP3Q6Q6R5 217 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 IGF2-ASQ6U949 168 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 CLEC18BQ6UXF7 455 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 OR51B6Q9H340 312 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 PLEKHJ1Q9NW61 149 aa12.14□□□□□ -0.47
CACNA1C-231ENST00000616390 TUBAL3A6NHL2 446 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 NUDT19A8MXV4 375 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 MFNGO00587 321 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 NTN3O00634 580 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 SNAPC5O75971 98 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 IL2RAP01589 272 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 APOC3P02656 99 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 HPNP05981 417 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 HOXB5P09067 269 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ACKR3P25106 362 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ZFP36L1Q07352 338 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ETV3LQ6ZN32 361 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ACOT7LQ6ZUV0 252 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 UBALD2Q8IYN6 164 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 KCNRGQ8N5I3 272 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 SPTSSAQ969W0 71 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM230Q96A57 120 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 PECRQ9BY49 303 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 TAS2R3Q9NYW6 316 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 ASPMQ8IZT6 3477 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 IGKV1D-8A0A087WSZ0 117 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 LOC102725191A0A1B0GVB3 256 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 VAMP5O95183 116 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 DUSP3P51452 185 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 AKR1C2P52895 323 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 RRADP55042 308 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 AKR1C1Q04828 323 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 TAF9Q16594 264 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 LPCAT3Q6P1A2 487 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 DYRK2Q92630 601 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
CACNA1C-231ENST00000616390 NDUFS8O00217 210 aa12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 SERPINA5P05154 406 aa12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 UBBP0CG47 229 aa12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 ZP3P21754 424 aa12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 PSMB6P28072 239 aa12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-231ENST00000616390 HGFACQ04756 655 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms