RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 THBS4P35443 961 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR3A4PP47883 348 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF260Q3ZCT1 412 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAM27BQ5VT28 67 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 CLEC18BQ6UXF7 455 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR9K2Q8NGE7 335 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 CNTNAP3BQ96NU0 1288 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 SHARPINQ9H0F6 387 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 RGCCQ9H4X1 137 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 NARFLQ9H6Q4 476 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 GPR160Q9UJ42 338 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ANXA10Q9UJ72 324 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 BCL2L11O43521 198 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 TRA2AQ13595 282 aaKnown RBP eCLIP4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 THOC3Q96J01 351 aaKnown RBP4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 RALYQ9UKM9 306 aaKnown RBP4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 DOCK11Q5JSL3 2073 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 IGLV3-12A0A075B6K2 115 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 C9orf170A2RU37 121 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ANKRD30BLA7E2S9 258 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ZNF587BE7ETH6 402 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 B3GALNT1O75752 331 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 GLRA1P23415 457 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 RPL35P42766 123 aaKnown RBP4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ERVFC1-1P60608 527 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 ARF1P84077 181 aaKnown RBP4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 PEA15Q15121 130 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 VASH2Q86V25 355 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 STX12Q86Y82 276 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR5L1Q8NGL2 311 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR51H1Q8NH63 302 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 NINJ1Q92982 152 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 FBXW5Q969U6 566 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 GFI1Q99684 422 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 NELFAQ9H3P2 528 aa4.97□□□□□ -1.61
SYNCRIP-204ENST00000616122 RPS10-NUDT3A0A1W2PQS6 291 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 DNPH1O43598 174 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 IFNA5P01569 189 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 ISG15P05161 165 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 PABPC1L2AQ5JQF8 200 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 SLC25A42Q86VD7 318 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 PRR18Q8N4B5 295 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR10D3Q8NH80 312 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 OR1S1Q8NH92 325 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 KIRREL1Q96J84 757 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 FAAP24Q9BTP7 215 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 MRPL13Q9BYD1 178 aaKnown RBP4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 CHST5Q9GZS9 411 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 WDR13Q9H1Z4 485 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 TMEM231Q9H6L2 316 aa4.96□□□□□ -1.61
SYNCRIP-204ENST00000616122 A0A1B0GTI1 187 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PDCD6O75340 191 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PIGPP57054 158 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PMS2CLQ68D20 193 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ADAM5Q6NVV9 412 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 BRICD5Q6PL45 260 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR56B2PQ8NGI1 322 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 SAP25Q8TEE9 199 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PBDC1Q9BVG4 233 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 TGIF2Q9GZN2 237 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 UNKLQ9H9P5 680 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 G6PC2Q9NQR9 355 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 UNC80Q8N2C7 3258 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM14DPA8MWL7 114 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 HSPB6O14558 160 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 SPRY1O43609 319 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD37P11049 281 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD1BP29016 333 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 IL2RGP31785 369 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 NKX2-1P43699 371 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 GSK3AP49840 483 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB5BP61020 215 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 SRPXP78539 464 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RBM39Q14498 530 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 SURF2Q15527 256 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 DHRS13Q6UX07 377 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 Q6ZRG5 221 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM219AQ8IW50 185 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR5AS1Q8N127 324 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 LRRC46Q96FV0 321 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 GPR132Q9UNW8 380 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 NLRC5Q86WI3 1866 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF816-ZNF321PA0A0X1KG74 233 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR6C65A6NJZ3 312 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ITGB2P05107 769 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM50BP56557 158 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZSCAN4Q8NAM6 433 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 MARVELD3Q96A59 401 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 MRPS24Q96EL2 167 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 HEXA-AS1Q9H8Q6 139 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 WDR54Q9H977 334 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RASL12Q9NYN1 266 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PIGBOS1A0A0B4J2F0 54 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 LRP3O75074 770 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 SNRNP70P08621 437 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD46P15529 392 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB6AP20340 208 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZBTB25P24278 435 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 HAAOP46952 286 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB1AP62820 205 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms