RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PATZ1Q9HBE1 687 aaKnown RBP11.12□□□□□ -0.63
MDC1-209ENST00000613547 VCX3AQ9NNX9 186 aa11.12□□□□□ -0.63
MDC1-209ENST00000613547 TMEM138Q9NPI0 162 aa11.12□□□□□ -0.63
MDC1-209ENST00000613547 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
MDC1-209ENST00000613547 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
MDC1-209ENST00000613547 CEACAM18A8MTB9 384 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 NOS1APO75052 506 aaPredicted RBP11.11□□□□□ -0.63
MDC1-209ENST00000613547 RHBDL1O75783 438 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 NXPH2O95156 264 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 PLATP00750 562 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 ACAA1P09110 424 aaPredicted RBP11.11□□□□□ -0.63
MDC1-209ENST00000613547 PGA5P0DJD9 388 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 EGR1P18146 543 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 FSTP19883 344 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 PSMB9P28065 219 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 TGFBR2P37173 567 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 RBMXP38159 391 aaKnown RBP11.11□□□□□ -0.63
MDC1-209ENST00000613547 POU3F4P49335 361 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 GMFBP60983 142 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 DOC2BQ14184 412 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 ESCO2Q56NI9 601 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 ARMCX4Q5H9R4 360 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 Q8IYB0 196 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 LINC01356Q8N9X3 169 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 C19orf18Q8NEA5 215 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
MDC1-209ENST00000613547 DERL3Q96Q80 235 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 GPER1Q99527 375 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
MDC1-209ENST00000613547 IGKV1-27A0A075B6S5 117 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 A0A087WXM4 84 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 TRBV5-7A0A0A0MS05 114 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 NKX6-3A6NJ46 265 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 TRAPPC2LH3BP13 241 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 SYNGR1O43759 233 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 CD5LO43866 347 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 FOXH1O75593 365 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 GPX5O75715 221 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 BDKRB2P30411 391 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 GABRA5P31644 462 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 IL2RGP31785 369 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 KISS1Q15726 138 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 FIP1L1Q6UN15 594 aaKnown RBP11.1□□□□□ -0.63
MDC1-209ENST00000613547 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 FAM90A1Q86YD7 464 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 PHC2Q8IXK0 858 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 PNLDC1Q8NA58 520 aaKnown RBP11.1□□□□□ -0.63
MDC1-209ENST00000613547 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 C1orf159Q96HA4 380 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 SLITRK2Q9H156 845 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 WDR13Q9H1Z4 485 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 TCF7L1Q9HCS4 588 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 FOXJ3Q9UPW0 622 aa11.1□□□□□ -0.63
MDC1-209ENST00000613547 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 IGHV3OR15-7A0A075B7D8 119 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 A0A1W2PPK0 400 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
MDC1-209ENST00000613547 CCRL2O00421 344 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 ADAM20O43506 726 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 ARL6IP5O75915 188 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 RGS9O75916 674 aaPredicted RBP11.09□□□□□ -0.63
MDC1-209ENST00000613547 LY6G6DO95868 133 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 TGFAP01135 160 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 GYPAP02724 150 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 ALDOBP05062 364 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 MSMBP08118 114 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 WNT2P09544 360 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 PCMT1P22061 227 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 PITPNBP48739 271 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 PDZK1IP1Q13113 114 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 HSD17B12Q53GQ0 312 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 FAM166AQ6J272 317 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 CEACAM19Q7Z692 300 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 GLCCI1Q86VQ1 547 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 OR51A2Q8NGJ7 313 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 PHYHIPQ92561 330 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 SLAMF9Q96A28 289 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 MSI2Q96DH6 328 aaKnown RBP11.09□□□□□ -0.63
MDC1-209ENST00000613547 SPACA5Q96QH8 159 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 SMR3AQ99954 134 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 NRIP2Q9BQI9 281 aa11.09□□□□□ -0.63
MDC1-209ENST00000613547 ZNF696Q9H7X3 374 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms