RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 A0A1W2PRV1 198 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 C22orf46C9J442 243 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 MYL12AP19105 171 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 PRKACBP22694 351 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 EEF1B2P24534 225 aaKnown RBP10.23□□□□□ -0.77
CBWD3-208ENST00000612050 CCR9P51686 369 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 ATP1B3P54709 279 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 SRSF2Q01130 221 aaKnown RBP10.23□□□□□ -0.77
CBWD3-208ENST00000612050 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 GALEQ14376 348 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 RCN1Q15293 331 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 LPCAT4Q643R3 524 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 TMEM42Q69YG0 159 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 TMPRSS11AQ6ZMR5 421 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 ZNF788Q6ZQV5 615 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 Q8IYB0 196 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 SYS1Q8N2H4 156 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 FAM216BQ8N7L0 139 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 OR13C3Q8NGS6 347 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 OR2G2Q8NGZ5 317 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 TBC1D15Q8TC07 691 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 LGALS12Q96DT0 336 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 CPNE2Q96FN4 548 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-208ENST00000612050 PKIBQ9C010 78 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 CHST5Q9GZS9 411 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 WDR13Q9H1Z4 485 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 SMURF1Q9HCE7 757 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 GLS2Q9UI32 602 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 PCDHGB5Q9Y5G0 923 aa10.23□□□□□ -0.77
CBWD3-208ENST00000612050 IGHV3OR16-10A0A075B7F0 116 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 PQLC2LA1A4F0 135 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 A6NIN4 97 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 H3BSH0 61 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 TNFRSF13BO14836 293 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-208ENST00000612050 SIGLEC5O15389 551 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 RHBDL1O75783 438 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ISG15P05161 165 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ACAA1P09110 424 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-208ENST00000612050 TGM4P49221 684 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 RBP2P50120 134 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 CAV3P56539 151 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 OR12D2P58182 307 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ARF6P62330 175 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 HOXA4Q00056 320 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-208ENST00000612050 IL24Q13007 206 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 IL18R1Q13478 541 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 FDX2Q6P4F2 183 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 Q6ZSR3 168 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 C9orf139Q6ZV77 190 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 LHFPL3Q86UP9 236 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 MKXQ8IYA7 352 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ZNF561Q8N587 486 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 KIR3DL3Q8N743 410 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 SIGLECL1Q8N7X8 197 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ANGPTL6Q8NI99 470 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 NPRL2Q8WTW4 380 aa10.22□□□□□ -0.77
CBWD3-208ENST00000612050 ANK3Q12955 4377 aaKnown RBP10.21□□□□□ -0.77
CBWD3-208ENST00000612050 TRBV23-1A0A0A0MS06 115 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 TMEM212A6NML5 194 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 MAGEB3O15480 346 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 PLATP00750 562 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 PGA5P0DJD9 388 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 PSG2P11465 335 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 ISL1P61371 349 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 ALKBH1Q13686 389 aaKnown RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 DMRTC1Q5HYR2 192 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 LHFPL2Q6ZUX7 228 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 PRSS35Q8N3Z0 413 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 DNAAF1Q8NEP3 725 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 TSEN15Q8WW01 171 aaKnown RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 LHX4Q969G2 390 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 DACT3Q96B18 629 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 SPSB1Q96BD6 273 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 KCTD12Q96CX2 325 aaKnown RBP10.21□□□□□ -0.78
CBWD3-208ENST00000612050 CEP19Q96LK0 163 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 GAFA1Q96PS6 74 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 DCTN5Q9BTE1 182 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 AMBNQ9NP70 447 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 FRRS1LQ9P0K9 344 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 OR14J1Q9UGF5 321 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 FAM96BQ9Y3D0 163 aa10.21□□□□□ -0.78
CBWD3-208ENST00000612050 RFPL4AA6NLU0 287 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 RFPL4AL1F8VTS6 287 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 J3QRE1 110 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 NOS1APO75052 506 aaPredicted RBP10.2□□□□□ -0.78
CBWD3-208ENST00000612050 KNG1P01042 644 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 CRYBA1P05813 215 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 CD2P06729 351 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 GABRB1P18505 474 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 PRTN3P24158 256 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 MPZP25189 248 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 DCKP27707 260 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 MTCP1P56278 107 aa10.2□□□□□ -0.78
CBWD3-208ENST00000612050 UBA52P62987 128 aaKnown RBP10.2□□□□□ -0.78
CBWD3-208ENST00000612050 NCR3LG1Q68D85 454 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms