RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 GCM1Q9NP62 436 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 MRPL22Q9NWU5 206 aaKnown RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 FBXO7Q9Y3I1 522 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CSAG2Q9Y5P2 127 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 V9GYH0 126 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CENPFP49454 3210 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF407Q9C0G0 2248 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ANKRD33BA6NCL7 494 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 PCP4L1A6NKN8 68 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 GALR2O43603 387 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 RAMP1O60894 148 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 GZMKP49863 264 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 HLXQ14774 488 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 PNLIPRP3Q17RR3 467 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 PDLIM3Q53GG5 364 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 OR8G2PQ6IF36 304 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 SLC51BQ86UW2 128 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 UPRTQ96BW1 309 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ZC3H10Q96K80 434 aaKnown RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ARPC5LQ9BPX5 153 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CHST6Q9GZX3 395 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 SLC17A5Q9NRA2 495 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 PLSCR3Q9NRY6 295 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 TINAGQ9UJW2 476 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 IGLV1-36A0A0B4J1U3 117 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 C3orf80F5H4A9 247 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF205O95201 554 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF883P0CG24 379 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 EIF2S3P41091 472 aaKnown RBP6.4□□□□□ -1.39
CSDE1-218ENST00000610726 EFNB2P52799 333 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 RPS27AP62979 156 aaKnown RBP6.4□□□□□ -1.39
CSDE1-218ENST00000610726 UBA52P62987 128 aaKnown RBP6.4□□□□□ -1.39
CSDE1-218ENST00000610726 RPL19P84098 196 aaKnown RBP6.4□□□□□ -1.39
CSDE1-218ENST00000610726 GGTLC2Q14390 218 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 OR2W3Q7Z3T1 314 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 FAM185AQ8N0U4 392 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 C1orf87Q8N0U7 546 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 ARRDC1Q8N5I2 433 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 WDSUB1Q8N9V3 476 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 CA5BP1Q8WTZ4 195 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 WDR89Q96FK6 387 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-218ENST00000610726 TECTBQ96PL2 329 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 KCNJ16Q9NPI9 418 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 QPCTLQ9NXS2 382 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 EDARQ9UNE0 448 aa6.4□□□□□ -1.39
CSDE1-218ENST00000610726 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TRAF3IP2O43734 574 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LRP3O75074 770 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 NDUFB6O95139 128 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PGA4P0DJD7 388 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PGA3P0DJD8 388 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PSMB6P28072 239 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 HOXA6P31267 233 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LGALS4P56470 323 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 HES1Q14469 280 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF79Q15937 498 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CSRP2Q16527 193 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FAM27BQ5VT28 67 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CPEB3Q8NE35 698 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FAM213BQ8TBF2 198 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 HAS2Q92819 552 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FBXW5Q969U6 566 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 MS4A3Q96HJ5 214 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CNTNAP3BQ96NU0 1288 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF649Q9BS31 505 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 MAGT1Q9H0U3 335 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PLXNA3P51805 1871 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 FREM3P0C091 2139 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CDIPTO14735 213 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PDCD6O75340 191 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 GPR12P47775 334 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 RPP30P78346 268 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 IFITM3Q01628 133 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ZNF239Q16600 458 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 ATPAF1Q5TC12 328 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LINC01590Q5TEZ4 76 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TMUB2Q71RG4 321 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TIPARPQ7Z3E1 657 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LYG2Q86SG7 212 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 NAA40Q86UY6 237 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 HGDQ93099 445 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TIMD4Q96H15 378 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 RIMS4Q9H426 269 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 CHCHD2Q9Y6H1 151 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 NLRC5Q86WI3 1866 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 DOPEY2Q9Y3R5 2298 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 hCG_1809904A0A1W2PP81 198 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PPE2 198 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PR64 198 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 A0A1W2PRV1 198 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 SNRPGP15A8MWD9 76 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 LANCL1O43813 399 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 NGFP01138 241 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 HOXA1P49639 335 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 PSG4Q00888 419 aa6.39□□□□□ -1.39
CSDE1-218ENST00000610726 SSBP1Q04837 148 aaKnown RBP6.39□□□□□ -1.39
CSDE1-218ENST00000610726 TMEM128Q5BJH2 165 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms