RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZYG11BQ9C0D3 744 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ACTR3CQ9C0K3 210 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 TLNRD1Q9H1K6 362 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 PARVBQ9HBI1 364 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 MYOZ1Q9NP98 299 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 KCNJ16Q9NPI9 418 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ZC4H2Q9NQZ6 224 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 YARS2Q9Y2Z4 477 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 USH1CQ9Y6N9 552 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ABCB11O95342 1321 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 CAMSAP1Q5T5Y3 1602 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 NACAE9PAV3 2078 aa2.64□□□□□ -1.99
SMCHD1-213ENST00000609587 ROCK2O75116 1388 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 PCF11O94913 1555 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 C9orf84Q5VXU9 1444 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 A0A0B4J2E0 115 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GLYATL1P3A0A0U1RQE8 302 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 A0A1B0GX12 115 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2AT4A6NND4 320 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 MIF4GDA9UHW6 222 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 FTCDNL1E5RQL4 147 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 H0Y980 276 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 J3QLI3 93 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 hCG_2039718K7EN88 272 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 ATP8B1O43520 1251 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 KLRC4O43908 158 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 DPM1O60762 260 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 HSBP1O75506 76 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 MED6O75586 246 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GLSO94925 669 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 TNFAIP8O95379 198 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 HLA-AP01891 365 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 NQO1P15559 274 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF250P15622 560 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF823P16415 610 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GNRHRP30968 328 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CDKN2BP42772 138 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CRISP1P54107 249 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CLDN6P56747 220 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 MLLT11Q13015 90 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GINS1Q14691 196 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GABRA6Q16445 453 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 UBE2SQ16763 222 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 BRMS1LQ5PSV4 323 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 ANKRD22Q5VYY1 191 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 TEX43Q6ZNM6 134 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 Q6ZT83 130 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM92BQ6ZTR7 304 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CLVS1Q8IUQ0 354 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CYB561D1Q8N8Q1 229 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR1M1Q8NGA1 313 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR51D1Q8NGF3 324 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5L1Q8NGL2 311 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 PIGXQ8TBF5 258 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 DYNC2LI1Q8TCX1 351 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 APH1BQ8WW43 257 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 NELFBQ8WX92 580 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR8D1Q8WZ84 308 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5P2Q8WZ92 322 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CREB3L1Q96BA8 519 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 APH1AQ96BI3 265 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 DGCR14Q96DF8 476 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 STACQ99469 402 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 NAA50Q9GZZ1 169 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 VCX3AQ9NNX9 186 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 XPNPEP1Q9NQW7 623 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 RHBDL2Q9NX52 303 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 CMTM6Q9NX76 183 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 GUCA1BQ9UMX6 200 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 ACOT9Q9Y305 439 aa2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 POLR3HQ9Y535 204 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-213ENST00000609587 FLT4P35916 1363 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 RFX7Q2KHR2 1363 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 IGHV5-51A0A0C4DH38 117 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 ANKRD20A5PA0PJZ0 165 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 C21orf140B9A014 251 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 C15orf65H3BRN8 121 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC9A3R1O14745 358 aaPredicted RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 GABARAPO95166 117 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CTDNEP1O95476 244 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PPBPP02775 128 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CD74P04233 296 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CTSLP07711 333 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PET100P0DJ07 73 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 KCNE1P15382 129 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 CEACAM6P40199 344 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10A3P58181 314 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2B8PP59922 312 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PSME3P61289 254 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SEMG2Q02383 582 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 AESQ08117 197 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SRSF6Q13247 344 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC9A3R2Q15599 337 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 ATP6V1FQ16864 119 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 ACSM3Q53FZ2 586 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 PPM1LQ5SGD2 360 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 TMEM42Q69YG0 159 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 WDFY1Q8IWB7 410 aa2.62□□□□□ -1.99
SMCHD1-213ENST00000609587 STK40Q8N2I9 435 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms