RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 PHYHD1Q5SRE7 291 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF679Q8IYX0 411 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 GTPBP8Q8N3Z3 284 aaPredicted RBP8.64□□□□□ -1.03
CTCFL-222ENST00000609232 PRSS33Q8NF86 280 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 OR4D6Q8NGJ1 314 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 ASB10Q8WXI3 467 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 RDH5Q92781 318 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF319Q9P2F9 582 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 BOKQ9UMX3 212 aaPredicted RBP8.64□□□□□ -1.03
CTCFL-222ENST00000609232 HDGFL3Q9Y3E1 203 aa8.64□□□□□ -1.03
CTCFL-222ENST00000609232 GOSR2O14653 212 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 AGPAT2O15120 278 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 PLPP2O43688 288 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF35P13682 527 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 HTR2CP28335 458 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 BLVRBP30043 206 aaPredicted RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 PRSS3P35030 304 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 EIF2S3P41091 472 aaKnown RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 KIR3DL2P43630 455 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 MMP15P51511 669 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 PRB3Q04118 309 aaPredicted RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 GGTLC2Q14390 218 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 SP6Q3SY56 376 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 MOB3CQ70IA8 216 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 DND1Q8IYX4 353 aaKnown RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 C12orf45Q8N5I9 185 aaPredicted RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 FADS6Q8N9I5 356 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF519Q8TB69 540 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 MRPS24Q96EL2 167 aaKnown RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 PGLYRP3Q96LB9 341 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 SRXN1Q9BYN0 137 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF442Q9H7R0 627 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 HRASLSQ9HDD0 168 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 HECTD1Q9ULT8 2610 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 EIF3GO75821 320 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 GABRA1P14867 456 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 RPS2P15880 293 aaKnown RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ADH6P28332 368 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 DLX5P56178 289 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 SOX8P57073 446 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ACSM1Q08AH1 577 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 AIMP2Q13155 320 aaKnown RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 TRAM1Q15629 374 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 HFEQ30201 348 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 TPRA1Q86W33 373 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 WNT2BQ93097 391 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 MEGF10Q96KG7 1140 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 TRIB1Q96RU8 372 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 NAA11Q9BSU3 229 aaPredicted RBP8.63□□□□□ -1.03
CTCFL-222ENST00000609232 LRFN3Q9BTN0 628 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 GLRX2Q9NS18 164 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 NDRG3Q9UGV2 375 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 DOPEY1Q5JWR5 2465 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 MALRD1Q5VYJ5 2156 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 ARHGAP21Q5T5U3 1957 aa8.63□□□□□ -1.03
CTCFL-222ENST00000609232 IGLV3-32A0A0A0MS00 114 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 A0A1B0GUH1 482 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 RBMXL2O75526 392 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 DKK1O94907 266 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 RAB3DO95716 219 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF32P17041 273 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 RAB13P51153 203 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 CSNK2A1P68400 391 aaPredicted RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 DEFA6Q01524 100 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 DYRK1AQ13627 763 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 LINC00303Q3SY05 128 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 OR2B11Q5JQS5 317 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 TSPO2Q5TGU0 170 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 GLT8D1Q68CQ7 371 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 DMKNQ6E0U4 476 aaPredicted RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 C17orf78Q8N4C9 275 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 BPIFCQ8NFQ6 507 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 RNASE11Q8TAA1 199 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 SEH1LQ96EE3 360 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 SSX3Q99909 188 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 SPRY4Q9C004 299 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 PBOV1Q9GZY1 135 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 B4GALT7Q9UBV7 327 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 PURGQ9UJV8 347 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF850A8MQ14 1090 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 F5H5P2 479 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ZIC3O60481 467 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 SORDQ00796 357 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 PSMF1Q92530 271 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 OXGR1Q96P68 337 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ZCCHC4Q9H5U6 513 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 CNTD2Q9H8S5 307 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 PROK2Q9HC23 129 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 GJE1A6NN92 205 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 RRP8O43159 456 aaKnown RBP8.62□□□□□ -1.03
CTCFL-222ENST00000609232 SNAPC5O75971 98 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 ABHD16AO95870 558 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 PHLDA2Q53GA4 152 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 KRBOX4Q5JUW0 171 aa8.62□□□□□ -1.03
CTCFL-222ENST00000609232 C6orf201Q7Z4U5 140 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms