RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CXCR4P61073 352 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ESRRGP62508 458 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF829Q3KNS6 432 aaPredicted RBP6.21□□□□□ -1.42
CUX1-219ENST00000606749 CLVS2Q5SYC1 327 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF684Q5T5D7 378 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 LCN1P1Q5VSP4 162 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 AADACL4Q5VUY2 407 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 TMEM200BQ69YZ2 307 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF322Q6U7Q0 402 aaPredicted RBP6.21□□□□□ -1.42
CUX1-219ENST00000606749 Q6ZSR3 168 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF573Q86YE8 665 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 MKXQ8IYA7 352 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ELMOD2Q8IZ81 293 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 FAM185AQ8N0U4 392 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF561Q8N587 486 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 C11orf42Q8N5U0 333 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 TCEANCQ8N8B7 351 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 POC1AQ8NBT0 407 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 TMEM185AQ8NFB2 350 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 OR14K1Q8NGZ2 314 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 OR5K1Q8NHB7 308 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 PPP1R35Q8TAP8 253 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ZNF488Q96MN9 340 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 SSX3Q99909 188 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 TTTY10Q9BZA0 68 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 PPA2Q9H2U2 334 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 ADGRL4Q9HBW9 690 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 C19orf12Q9NSK7 152 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 FBLN5Q9UBX5 448 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 OR52A1Q9UKL2 312 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 IKZF2Q9UKS7 526 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 V9GYS6 101 aa6.21□□□□□ -1.42
CUX1-219ENST00000606749 A0A1B0GTI1 187 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 A6NIN4 97 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SLC22A31A6NKX4 558 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 ZAR1LA6NP61 321 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 LOC110117498-PIK3R3F6TDL0 507 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 H3BUX3 64 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 J3QT63 122 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 M0R129 80 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SLC1A7O00341 560 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 ANGPTL7O43827 346 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 MITFO75030 526 aaPredicted RBP6.2□□□□□ -1.42
CUX1-219ENST00000606749 PGA5P0DJD9 388 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 CAPZA1P52907 286 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 ACTR3P61158 418 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 RPL31P62899 125 aaKnown RBP6.2□□□□□ -1.42
CUX1-219ENST00000606749 EGR3Q06889 387 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SMIM21Q3B7S5 101 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 BCL2L15Q5TBC7 163 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SLX4IPQ5VYV7 408 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 NXNL2Q5VZ03 156 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 C12orf73Q69YU5 71 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 CRIP3Q6Q6R5 217 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 ASRGL1Q7L266 308 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SLC35F2Q8IXU6 374 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 OR4M1Q8NGD0 313 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 OR2T27Q8NH04 317 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 TMEM163Q8TC26 289 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 BCAS4Q8TDM0 211 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 RORBQ92753 470 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 UBE2FQ969M7 185 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 CNN2Q99439 309 aaKnown RBP6.2□□□□□ -1.42
CUX1-219ENST00000606749 MNTQ99583 582 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 NRIP2Q9BQI9 281 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 CADM1Q9BY67 442 aaKnown RBP6.2□□□□□ -1.42
CUX1-219ENST00000606749 FAM234AQ9H0X4 552 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 HEXA-AS1Q9H8Q6 139 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 HES4Q9HCC6 221 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 GPR173Q9NS66 373 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 CLN6Q9NWW5 311 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 MRM2Q9UI43 246 aaKnown RBP6.2□□□□□ -1.42
CUX1-219ENST00000606749 GTF2A1LQ9UNN4 478 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SLC22A13Q9Y226 551 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 SNX5Q9Y5X3 404 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 R4GMQ9 66 aa6.2□□□□□ -1.42
CUX1-219ENST00000606749 VWFP04275 2813 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 A0A1W2PPH5 198 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 DHRS7CA6NNS2 312 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 ZNF670-ZNF695F2Z2N8 137 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 G3V2T6 193 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 NXPH2O95156 264 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 TSPAN15O95858 294 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 TK1P04183 234 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 CCL3L1P16619 93 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 MPZP25189 248 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 PAX6P26367 422 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 GABRA5P31644 462 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 KIR2DS4P43632 304 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 CEBPDP49716 269 aaPredicted RBP6.19□□□□□ -1.42
CUX1-219ENST00000606749 ERVK11-1P61568 191 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 ATP6AP1Q15904 470 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 LY6EQ16553 131 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 AANATQ16613 207 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 LRRC75BQ2VPJ9 315 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 KDM4DQ6B0I6 523 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 PLEKHG7Q6ZR37 379 aa6.19□□□□□ -1.42
CUX1-219ENST00000606749 SSX6Q7RTT6 188 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms