RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ALKBH1Q13686 389 aaKnown RBP11.93□□□□□ -0.5
TUBE1-208ENST00000604743 UBE2V2Q15819 145 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 KLHL22Q53GT1 634 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 ATPAF1Q5TC12 328 aaPredicted RBP11.93□□□□□ -0.5
TUBE1-208ENST00000604743 METTL11BQ5VVY1 283 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 TTC23Q5W5X9 447 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF788Q6ZQV5 615 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 DHRSXQ8N5I4 330 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 PACRGLQ8N7B6 248 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF676Q8N7Q3 588 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 CCDC54Q8NEL0 328 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 ANGPTL6Q8NI99 470 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 FGGYQ96C11 551 aa11.93□□□□□ -0.5
TUBE1-208ENST00000604743 MYCBPQ99417 103 aaPredicted RBP11.93□□□□□ -0.5
TUBE1-208ENST00000604743 IGKV1D-17A0A075B6S4 117 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 NXPH2O95156 264 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 IGHA1P01876 353 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 LIPFP07098 398 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ACAA1P09110 424 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 PSG2P11465 335 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF20P17024 532 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 NDUFB7P17568 137 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 CAPZA1P52907 286 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 HILS1P60008 231 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 IL13RA1P78552 427 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 DGUOKQ16854 277 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 FDX2Q6P4F2 183 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 RBMS3Q6XE24 437 aaKnown RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 BRD3OSQ6XYD6 125 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 USP43Q70EL4 1123 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 CALHM1Q8IU99 346 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ZNRF1Q8ND25 227 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 OR10AC1Q8NH08 325 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ADAT3Q96EY9 351 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 MED30Q96HR3 178 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 WDFY2Q96P53 400 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 JMJD8Q96S16 334 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 CNTD2Q9H8S5 307 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 C8orf4Q9NR00 106 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 INPP5EQ9NRR6 644 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 ONECUT1Q9UBC0 465 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 SLC25A10Q9UBX3 287 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 OR14J1Q9UGF5 321 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
TUBE1-208ENST00000604743 POLDIP2Q9Y2S7 368 aa11.92□□□□□ -0.5
TUBE1-208ENST00000604743 RFPL4AA6NLU0 287 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 E9PI62 339 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 RFPL4AL1F8VTS6 287 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 TRIM77I1YAP6 450 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 RRP9O43818 475 aaKnown RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 CEBPDP49716 269 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 CCR9P51686 369 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 FUT6P51993 359 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 GBX2P52951 348 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 SMIM21Q3B7S5 101 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 OGFRL1Q5TC84 451 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 GPR157Q5UAW9 335 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 PDZD9Q8IXQ8 264 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 SYS1Q8N2H4 156 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 OR51A4Q8NGJ6 313 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 SLAMF9Q96A28 289 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 MRPS18AQ9NVS2 196 aaKnown RBP11.91□□□□□ -0.5
TUBE1-208ENST00000604743 RASL12Q9NYN1 266 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 HHLA2Q9UM44 414 aa11.91□□□□□ -0.5
TUBE1-208ENST00000604743 IGKV1-27A0A075B6S5 117 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 OR4C45A6NMZ5 311 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 ISG15P05161 165 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 OCM2P0CE71 109 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 OCMP0CE72 109 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-208ENST00000604743 LIMS3P0CW19 117 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 LIMS4P0CW20 117 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 CAPGP40121 348 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 PP6455Q8WZ26 134 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 LHX4Q969G2 390 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 C10orf35Q96D05 121 aa11.9□□□□□ -0.5
TUBE1-208ENST00000604743 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-208ENST00000604743 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms