RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 NUDT16L1Q9BRJ7 211 aaKnown RBP13.05□□□□□ -0.32
RPS28-203ENST00000600659 PLEKHA1Q9HB21 404 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 HES4Q9HCC6 221 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 NLKQ9UBE8 527 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 AUP1Q9Y679 476 aa13.05□□□□□ -0.32
RPS28-203ENST00000600659 XPNPEP2O43895 674 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
RPS28-203ENST00000600659 PSG2P11465 335 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 PIPP12273 146 aaPredicted RBP13.04□□□□□ -0.32
RPS28-203ENST00000600659 MMP9P14780 707 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 EPHA1P21709 976 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 GLRA1P23415 457 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 ERVK11-1P61568 191 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 ASPHD2Q6ICH7 369 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 RNF144BQ7Z419 303 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 C8orf59Q8N0T1 100 aaPredicted RBP13.04□□□□□ -0.32
RPS28-203ENST00000600659 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 NRIP2Q9BQI9 281 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 DNTTIP1Q9H147 329 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 METRNQ9UJH8 293 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 HHLA2Q9UM44 414 aa13.04□□□□□ -0.32
RPS28-203ENST00000600659 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
RPS28-203ENST00000600659 SIRT4Q9Y6E7 314 aaPredicted RBP13.04□□□□□ -0.32
RPS28-203ENST00000600659 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 DGUOKQ16854 277 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 KRTAP24-1Q3LI83 254 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 ACP7Q6ZNF0 438 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 UTS2BQ765I0 119 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 ZNF573Q86YE8 665 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 LY6G5BQ8NDX9 201 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 NANPQ8TBE9 248 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 PP6455Q8WZ26 134 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 FGGYQ96C11 551 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
RPS28-203ENST00000600659 PKIBQ9C010 78 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 FKBP14Q9NWM8 211 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 MAB21L2Q9Y586 359 aa13.03□□□□□ -0.32
RPS28-203ENST00000600659 FAM230AA0A1W2PPH8 454 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 TMEM212A6NML5 194 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 F8VVB4 439 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 F8VWA3 439 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 H0YJX3 145 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 SIGLEC5O15389 551 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 FUT6P51993 359 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 IL24Q13007 206 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 MRPL28Q13084 256 aaKnown RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 CDK5R1Q15078 307 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 BTN2A1Q7KYR7 527 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 SLC36A1Q7Z2H8 476 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 BATF2Q8N1L9 274 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 ZNF676Q8N7Q3 588 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 ZNF671Q8TAW3 534 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 MRI1Q9BV20 369 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 PLCXD1Q9NUJ7 323 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 MTCH1Q9NZJ7 389 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.33
RPS28-203ENST00000600659 RPUSD1Q9UJJ7 312 aaKnown RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 EXOSC1Q9Y3B2 195 aaKnown RBP13.02□□□□□ -0.33
RPS28-203ENST00000600659 IRGMA1A4Y4 181 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 VENTXO95231 258 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 PLATP00750 562 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 ATF1P18846 271 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
RPS28-203ENST00000600659 FGF12P61328 243 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 ST3GAL4Q11206 333 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 TEX29Q8N6K0 151 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 CD177Q8N6Q3 437 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 DNAAF1Q8NEP3 725 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 C8orf46Q8TAG6 207 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 ST8SIA4Q92187 359 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 SDSLQ96GA7 329 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 TMEM80Q96HE8 168 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 TBX15Q96SF7 602 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 VCXQ9H320 206 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 CNOT2Q9NZN8 540 aaKnown RBP13.01□□□□□ -0.33
RPS28-203ENST00000600659 ZNF69Q9UC07 566 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 POLDIP2Q9Y2S7 368 aa13.01□□□□□ -0.33
RPS28-203ENST00000600659 OGG1O15527 345 aa13□□□□□ -0.33
RPS28-203ENST00000600659 MT-ND2P03891 347 aa13□□□□□ -0.33
RPS28-203ENST00000600659 SFTPBP07988 381 aa13□□□□□ -0.33
RPS28-203ENST00000600659 CCDC159P0C7I6 412 aa13□□□□□ -0.33
RPS28-203ENST00000600659 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
RPS28-203ENST00000600659 C21orf33P30042 268 aaPredicted RBP13□□□□□ -0.33
RPS28-203ENST00000600659 CEBPDP49716 269 aaPredicted RBP13□□□□□ -0.33
RPS28-203ENST00000600659 IKZF1Q13422 519 aa13□□□□□ -0.33
RPS28-203ENST00000600659 CNN3Q15417 329 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms