RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 RAB40BQ12829 278 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 TMEM244Q5VVB8 128 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 LPCAT4Q643R3 524 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 FDX2Q6P4F2 183 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 LHFPL3Q86UP9 236 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 PELI1Q96FA3 418 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 MED30Q96HR3 178 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 ZNF488Q96MN9 340 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 WDFY2Q96P53 400 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 C8orf4Q9NR00 106 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 INPP5EQ9NRR6 644 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 FRRS1LQ9P0K9 344 aa23.28■■□□□ 1.32
ZNF558-206ENST00000599938 RPL36Q9Y3U8 105 aaKnown RBP23.28■■□□□ 1.32
ZNF558-206ENST00000599938 FAM230AA0A1W2PPH8 454 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 SIGLEC5O15389 551 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 IGHA1P01876 353 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 PGA5P0DJD9 388 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 MMP9P14780 707 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 NANOS3P60323 173 aaKnown RBP23.27■■□□□ 1.32
ZNF558-206ENST00000599938 GALEQ14376 348 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 DGUOKQ16854 277 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 TUSC1Q2TAM9 212 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 C9orf139Q6ZV77 190 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 ZDHHC22Q8N966 263 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 CYGBQ8WWM9 190 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 H1FXQ92522 213 aaKnown RBP23.27■■□□□ 1.32
ZNF558-206ENST00000599938 C10orf35Q96D05 121 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 TBX15Q96SF7 602 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 RASL12Q9NYN1 266 aa23.27■■□□□ 1.32
ZNF558-206ENST00000599938 SLC25A10Q9UBX3 287 aaPredicted RBP23.27■■□□□ 1.32
ZNF558-206ENST00000599938 IGKV1D-17A0A075B6S4 117 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ANKRD65E5RJM6 399 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 SERPINA3P01011 423 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ACAA1P09110 424 aaPredicted RBP23.26■■□□□ 1.31
ZNF558-206ENST00000599938 PSG2P11465 335 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ARF6P62330 175 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ACTG1P63261 375 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 UBE2V2Q15819 145 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 BRD3OSQ6XYD6 125 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ACP7Q6ZNF0 438 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 PACRGLQ8N7B6 248 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 OR52I1Q8NGK6 324 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ZNF48Q96MX3 618 aaPredicted RBP23.26■■□□□ 1.31
ZNF558-206ENST00000599938 SIRPDQ9H106 197 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ONECUT1Q9UBC0 465 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 ZNF222Q9UK12 451 aa23.26■■□□□ 1.31
ZNF558-206ENST00000599938 NXPH2O95156 264 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 MPZP25189 248 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 ZNF691Q5VV52 312 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 ANGPTL5Q86XS5 388 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 CALHM1Q8IU99 346 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 BATF2Q8N1L9 274 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 SYS1Q8N2H4 156 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 FAM216AQ8WUB2 273 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 PP6455Q8WZ26 134 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 NRIP2Q9BQI9 281 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 PKIBQ9C010 78 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 CNTD2Q9H8S5 307 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 ERVK13-1Q9NX77 482 aa23.25■■□□□ 1.31
ZNF558-206ENST00000599938 SOX21Q9Y651 276 aaPredicted RBP23.25■■□□□ 1.31
ZNF558-206ENST00000599938 WBP4O75554 376 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 CLIC3O95833 236 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 ISG15P05161 165 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 ZNF20P17024 532 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 NDUFB7P17568 137 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 CCR9P51686 369 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 UBA52P62987 128 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 CNN3Q15417 329 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 SMN1Q16637 294 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 LY6G5BQ8NDX9 201 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 TMEM185AQ8NFB2 350 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 ADAT3Q96EY9 351 aaPredicted RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 DCTN5Q9BTE1 182 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 ISG20L2Q9H9L3 353 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 MRPS18AQ9NVS2 196 aaKnown RBP23.24■■□□□ 1.31
ZNF558-206ENST00000599938 KPTNQ9Y664 436 aa23.24■■□□□ 1.31
ZNF558-206ENST00000599938 DNAJC9-AS1A6NH13 148 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 NOS1APO75052 506 aaPredicted RBP23.23■■□□□ 1.31
ZNF558-206ENST00000599938 FUT6P51993 359 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 ALKBH1Q13686 389 aaKnown RBP23.23■■□□□ 1.31
ZNF558-206ENST00000599938 KLHL22Q53GT1 634 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 TTC23Q5W5X9 447 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 ZNF676Q8N7Q3 588 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 ZNRF1Q8ND25 227 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 BORCS8Q96FH0 119 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 HHLA2Q9UM44 414 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 MAB21L2Q9Y586 359 aa23.23■■□□□ 1.31
ZNF558-206ENST00000599938 RFPL4AA6NLU0 287 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 OR4C45A6NMZ5 311 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 RFPL4AL1F8VTS6 287 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 CAPZA1P52907 286 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 CAV3P56539 151 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 BPIFB3P59826 476 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 IL24Q13007 206 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 BAMBIQ13145 260 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 PDCD1Q15116 288 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 RUSC1-AS1Q66K80 236 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 CMTM4Q8IZR5 234 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 OR10AC1Q8NH08 325 aa23.22■■□□□ 1.31
ZNF558-206ENST00000599938 CNIH3Q8TBE1 160 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms