RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TMEM210A6NLX4 147 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 ZNF850A8MQ14 1090 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 GPR37O15354 613 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 ACKR3P25106 362 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 RPL15P61313 204 aaKnown RBP15.43■□□□□ 0.06
PNKP-213ENST00000599543 ISL1P61371 349 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 RELBQ01201 579 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 DMRTC1Q5HYR2 192 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 BCL2L15Q5TBC7 163 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 OLFML2AQ68BL7 652 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 STUMQ69YW2 141 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 ZNF391Q9UJN7 358 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 OR52A1Q9UKL2 312 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 FAM96BQ9Y3D0 163 aa15.43■□□□□ 0.06
PNKP-213ENST00000599543 SNTNA6NMZ2 147 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 J3QLW9 94 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 KCNAB3O43448 404 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 CST4P01036 141 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 IGHV4-59P01825 116 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 TTRP02766 147 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 ZNF19P17023 458 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 OR12D2P58182 307 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 LAIR2Q6ISS4 152 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 LDLRAD3Q86YD5 345 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 ZDHHC23Q8IYP9 409 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 C8orf59Q8N0T1 100 aaPredicted RBP15.42■□□□□ 0.06
PNKP-213ENST00000599543 ACBD7Q8N6N7 88 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 LY6G5BQ8NDX9 201 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 SETD9Q8NE22 299 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 OR5T2Q8NGG2 359 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 OR10Z1Q8NGY1 313 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 OR5P3Q8WZ94 311 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 H1FXQ92522 213 aaKnown RBP15.42■□□□□ 0.06
PNKP-213ENST00000599543 PIGCQ92535 297 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 RORBQ92753 470 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 RPL3LQ92901 407 aaKnown RBP15.42■□□□□ 0.06
PNKP-213ENST00000599543 DMRTB1Q96MA1 342 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 DNTTIP1Q9H147 329 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 GPR84Q9NQS5 396 aa15.42■□□□□ 0.06
PNKP-213ENST00000599543 RRP15Q9Y3B9 282 aaKnown RBP15.42■□□□□ 0.06
PNKP-213ENST00000599543 CLPSL1A2RUU4 121 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 IER3P46695 156 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 ACTC1P68032 377 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 ACTA1P68133 377 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 ATPAF1Q5TC12 328 aaPredicted RBP15.41■□□□□ 0.06
PNKP-213ENST00000599543 BRICD5Q6PL45 260 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 IZUMO2Q6UXV1 221 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 TFAP2CQ92754 450 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 RNF170Q96K19 258 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 HIST1H2AAQ96QV6 131 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 DCTN5Q9BTE1 182 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 WDR13Q9H1Z4 485 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 DPAGT1Q9H3H5 408 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 ISG20L2Q9H9L3 353 aaKnown RBP15.41■□□□□ 0.06
PNKP-213ENST00000599543 SIRT7Q9NRC8 400 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 SNTG1Q9NSN8 517 aa15.41■□□□□ 0.06
PNKP-213ENST00000599543 NUFIP1Q9UHK0 495 aaKnown RBP15.41■□□□□ 0.06
PNKP-213ENST00000599543 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
PNKP-213ENST00000599543 RPL36Q9Y3U8 105 aaKnown RBP15.41■□□□□ 0.06
PNKP-213ENST00000599543 NOTCH1P46531 2555 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 A6NIN4 97 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 H0YAE9 185 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 AKR7A2O43488 359 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 XPNPEP2O43895 674 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 GPR137BO60478 399 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 SELLP14151 372 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 EEF1B2P24534 225 aaKnown RBP15.4■□□□□ 0.06
PNKP-213ENST00000599543 DCTDP32321 178 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 KIR3DL2P43630 455 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 GUCA2AQ02747 115 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 SRSF4Q08170 494 aaKnown RBP15.4■□□□□ 0.06
PNKP-213ENST00000599543 METAP1DQ6UB28 335 aaPredicted RBP15.4■□□□□ 0.06
PNKP-213ENST00000599543 FAM220AQ7Z4H9 259 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 PRSS35Q8N3Z0 413 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 HPSE2Q8WWQ2 592 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 RNF166Q96A37 237 aaPredicted RBP15.4■□□□□ 0.06
PNKP-213ENST00000599543 C4orf36Q96KX1 117 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 ALG8Q9BVK2 526 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 VWFP04275 2813 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 CMYA5Q8N3K9 4069 aa15.4■□□□□ 0.06
PNKP-213ENST00000599543 BTBD17A6NE02 478 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 FADS2O95864 444 aaKnown RBP15.39■□□□□ 0.05
PNKP-213ENST00000599543 FBP1P09467 338 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 AMY2BP19961 511 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 TGM4P49221 684 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 GPM6AP51674 278 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 RAB40BQ12829 278 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 IL18R1Q13478 541 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 FAM76BQ5HYJ3 339 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 GDPGP1Q6ZNW5 385 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 CATSPERDQ86XM0 798 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 ELMOD2Q8IZ81 293 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 RDH10Q8IZV5 341 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 C8orf46Q8TAG6 207 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 NPRL2Q8WTW4 380 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 MED30Q96HR3 178 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 ERVK13-1Q9NX77 482 aa15.39■□□□□ 0.05
PNKP-213ENST00000599543 SLC25A10Q9UBX3 287 aaPredicted RBP15.39■□□□□ 0.05
PNKP-213ENST00000599543 RNF114Q9Y508 228 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms