RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OR5K1Q8NHB7 308 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 TNFRSF14Q92956 283 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 SDSLQ96GA7 329 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 MNTQ99583 582 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 C16orf95Q9H693 158 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 PLEKHA1Q9HB21 404 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 ENOPH1Q9UHY7 261 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 ZNF222Q9UK12 451 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.02□□□□□ -1.13
VRK3-216ENST00000599342 MAB21L2Q9Y586 359 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 R4GMQ9 66 aa8.02□□□□□ -1.13
VRK3-216ENST00000599342 hCG_1809904A0A1W2PP81 198 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 A0A1W2PPE2 198 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 A0A1W2PR64 198 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 A0A1W2PRV1 198 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 PRR32B1ATL7 298 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 G3V2T6 193 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 M0R129 80 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 DLGAP1O14490 977 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 NXPH2O95156 264 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 RPL31P62899 125 aaKnown RBP8.01□□□□□ -1.13
VRK3-216ENST00000599342 EGR3Q06889 387 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 BCDIN3DQ7Z5W3 292 aaKnown RBP8.01□□□□□ -1.13
VRK3-216ENST00000599342 TCEANCQ8N8B7 351 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 BEND2Q8NDZ0 799 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 TMEM163Q8TC26 289 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 PPP1R14AQ96A00 147 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 SLC7A6OSQ96CW6 309 aaPredicted RBP8.01□□□□□ -1.13
VRK3-216ENST00000599342 RBM4BQ9BQ04 359 aaKnown RBP8.01□□□□□ -1.13
VRK3-216ENST00000599342 FAM234AQ9H0X4 552 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 HEXA-AS1Q9H8Q6 139 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 ADGRL4Q9HBW9 690 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 GPR173Q9NS66 373 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 C19orf12Q9NSK7 152 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 SNX5Q9Y5X3 404 aa8.01□□□□□ -1.13
VRK3-216ENST00000599342 DHRS7CA6NNS2 312 aa8□□□□□ -1.13
VRK3-216ENST00000599342 H3BUX3 64 aa8□□□□□ -1.13
VRK3-216ENST00000599342 DYNC1I1O14576 645 aa8□□□□□ -1.13
VRK3-216ENST00000599342 SYNGR1O43759 233 aa8□□□□□ -1.13
VRK3-216ENST00000599342 TSPAN9O75954 239 aa8□□□□□ -1.13
VRK3-216ENST00000599342 KRT8P05787 483 aa8□□□□□ -1.13
VRK3-216ENST00000599342 PGA5P0DJD9 388 aa8□□□□□ -1.13
VRK3-216ENST00000599342 PRDX2P32119 198 aa8□□□□□ -1.13
VRK3-216ENST00000599342 LGALS4P56470 323 aa8□□□□□ -1.13
VRK3-216ENST00000599342 KRTAP10-3P60369 221 aa8□□□□□ -1.13
VRK3-216ENST00000599342 ATP6AP1Q15904 470 aa8□□□□□ -1.13
VRK3-216ENST00000599342 C2orf68Q2NKX9 166 aa8□□□□□ -1.13
VRK3-216ENST00000599342 LRRC75BQ2VPJ9 315 aa8□□□□□ -1.13
VRK3-216ENST00000599342 SLX4IPQ5VYV7 408 aa8□□□□□ -1.13
VRK3-216ENST00000599342 ASPHD2Q6ICH7 369 aa8□□□□□ -1.13
VRK3-216ENST00000599342 PLEKHG7Q6ZR37 379 aa8□□□□□ -1.13
VRK3-216ENST00000599342 ASRGL1Q7L266 308 aa8□□□□□ -1.13
VRK3-216ENST00000599342 ZDHHC13Q8IUH4 622 aa8□□□□□ -1.13
VRK3-216ENST00000599342 ELMOD2Q8IZ81 293 aa8□□□□□ -1.13
VRK3-216ENST00000599342 UTP4Q969X6 686 aaKnown RBP8□□□□□ -1.13
VRK3-216ENST00000599342 ZNF488Q96MN9 340 aa8□□□□□ -1.13
VRK3-216ENST00000599342 IL4I1Q96RQ9 567 aa8□□□□□ -1.13
VRK3-216ENST00000599342 SSX3Q99909 188 aa8□□□□□ -1.13
VRK3-216ENST00000599342 APOL4Q9BPW4 351 aa8□□□□□ -1.13
VRK3-216ENST00000599342 RAB18Q9NP72 206 aa8□□□□□ -1.13
VRK3-216ENST00000599342 CLN6Q9NWW5 311 aa8□□□□□ -1.13
VRK3-216ENST00000599342 USE1Q9NZ43 259 aa8□□□□□ -1.13
VRK3-216ENST00000599342 OR14J1Q9UGF5 321 aa8□□□□□ -1.13
VRK3-216ENST00000599342 V9GYS6 101 aa8□□□□□ -1.13
VRK3-216ENST00000599342 PQLC2LA1A4F0 135 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 A6NIN4 97 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 ZAR1LA6NP61 321 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 MAGEB4O15481 346 aaPredicted RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 MITFO75030 526 aaPredicted RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 SRSF10O75494 262 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 RPP14O95059 124 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 FASP25445 335 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 GABRA5P31644 462 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 CEBPDP49716 269 aaPredicted RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 RASSF2P50749 326 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 ERVFRD-1P60508 538 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 ODF4Q2M2E3 257 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 AADACL4Q5VUY2 407 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 TMEM42Q69YG0 159 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 C12orf73Q69YU5 71 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 MKXQ8IYA7 352 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 BATF2Q8N1L9 274 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 CD177Q8N6Q3 437 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 YIPF7Q8N8F6 280 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 OR4M1Q8NGD0 313 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 OR4C13Q8NGP0 309 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 OR14K1Q8NGZ2 314 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 OR2T27Q8NH04 317 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 TRMT10AQ8TBZ6 339 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 TBX5Q99593 518 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 NRIP2Q9BQI9 281 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 ADI1Q9BV57 179 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 CADM1Q9BY67 442 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 WARS2Q9UGM6 360 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 MRM2Q9UI43 246 aaKnown RBP7.99□□□□□ -1.13
VRK3-216ENST00000599342 SLC7A11Q9UPY5 501 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 TRRAPQ9Y4A5 3859 aa7.99□□□□□ -1.13
VRK3-216ENST00000599342 FAM230AA0A1W2PPH8 454 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms