RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 KCTD16Q68DU8 428 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 LPCAT3Q6P1A2 487 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 PAMR1Q6UXH9 720 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 HIST2H3AQ71DI3 136 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ATG4DQ86TL0 474 aaPredicted RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 RBM23Q86U06 439 aaKnown RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 ZNF567Q8N184 647 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 CBR4Q8N4T8 237 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 COX18Q8N8Q8 333 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ZNRF1Q8ND25 227 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ZNF439Q8NDP4 499 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 MFSD8Q8NHS3 518 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 MCFD2Q8NI22 146 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 NT5CQ8TCD5 201 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 CYGBQ8WWM9 190 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 TMEM230Q96A57 120 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 FOPNLQ96NB1 174 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 MARVELD1Q9BSK0 173 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 FAAP24Q9BTP7 215 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 EMC6Q9BV81 110 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 MS4A8Q9BY19 250 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 SCAND2PQ9GZW5 306 aaPredicted RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 LRTM1Q9HBL6 345 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 IDI2-AS1Q9NZ38 188 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ZNF223Q9UK11 482 aaPredicted RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 NEU3Q9UQ49 428 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ANGPT4Q9Y264 503 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 ST3GAL6Q9Y274 331 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 POLR1DQ9Y2S0 133 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 PIK3C2GO75747 1445 aa4.29□□□□□ -1.72
PAF1-208ENST00000598594 BAZ2AQ9UIF9 1905 aaKnown RBP4.29□□□□□ -1.72
PAF1-208ENST00000598594 CLUHO75153 1309 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 A0A1B0GVT2 93 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 B4DXG7 233 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 E9PLD3 99 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 M0QYV0 167 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 TXNDC9O14530 226 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 GALR3O60755 368 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 STK16O75716 305 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SEMA4FO95754 770 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 IGKV1D-16P01601 117 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 BPGMP07738 259 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 MRPL3P09001 348 aaKnown RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 SLC35G6P0C7Q6 338 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SMIM6P0DI80 62 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SULT1A3P0DMM9 295 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SULT1A4P0DMN0 295 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 GABRA1P14867 456 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 GNB3P16520 340 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 AK4P27144 223 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 MARK3P27448 753 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 PSMB9P28065 219 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CD34P28906 385 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SDC4P31431 198 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 FCGR2CP31995 323 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CEACAM8P31997 349 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 PPICP45877 212 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 GPR6P46095 362 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 OR1E2P47887 323 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 GZMMP51124 257 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 EFNA3P52797 238 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CRYBA2P53672 197 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 RAB5BP61020 215 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CKS1BP61024 79 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SLC35A2P78381 396 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 ELF3P78545 371 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 MXD1Q05195 221 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CD47Q08722 323 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 ACOT6Q3I5F7 207 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 ZNF324BQ6AW86 544 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 CNIH2Q6PI25 160 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 HOGA1Q86XE5 327 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CALHM3Q86XJ0 350 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 OR9Q1Q8NGQ5 310 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 OR5J2Q8NH18 312 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 LNX1Q8TBB1 728 aaPredicted RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 AGAP11Q8TF27 550 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SSC4DQ8WTU2 575 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 DCUN1D1Q96GG9 259 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 DIRAS2Q96HU8 199 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 PYURFQ96I23 114 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 TCEAL7Q9BRU2 100 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CCDC32Q9BV29 185 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 MROQ9BYG7 248 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 WDR13Q9H1Z4 485 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 LIME1Q9H400 295 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 FAM96AQ9H5X1 160 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 EXOSC3Q9NQT5 275 aaKnown RBP4.28□□□□□ -1.72
PAF1-208ENST00000598594 DNAJC27Q9NZQ0 273 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 JPT1Q9UK76 154 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 VDAC3Q9Y277 283 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 CD109Q6YHK3 1445 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 SETD5Q9C0A6 1442 aa4.28□□□□□ -1.72
PAF1-208ENST00000598594 TRAV8-4A0A0B4J246 113 aa4.27□□□□□ -1.73
PAF1-208ENST00000598594 TRBV5-4A0A0C4DH59 114 aa4.27□□□□□ -1.73
PAF1-208ENST00000598594 PQLC2LA1A4F0 135 aa4.27□□□□□ -1.73
PAF1-208ENST00000598594 RBMY1BA6NDE4 496 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms