RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 OR5P3Q8WZ94 311 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 FOXRED1Q96CU9 486 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ITPKCQ96DU7 683 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ELMOD3Q96FG2 381 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 RNF170Q96K19 258 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 DIRC2Q96SL1 478 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 ZDHHC8Q9ULC8 765 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 AK6Q9Y3D8 172 aaKnown RBP10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 V9GY05 133 aa10.23□□□□□ -0.77
SHKBP1-213ENST00000597325 VWFP04275 2813 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 IGKV1-9A0A0C4DH69 117 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 SHISA3A0PJX4 238 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM210A6NLX4 147 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 SPRY3O43610 288 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 NCR1O76036 304 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 CLEC2LP0C7M8 214 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 NAT2P11245 290 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 ADRA2CP18825 462 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF93P35789 620 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 RORCP51449 518 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 GPM6AP51674 278 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 MTCP1P56278 107 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 OR10A3P58181 314 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 GNG3P63215 75 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 DMRTC1Q5HYR2 192 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 SFXN4Q6P4A7 337 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 Q6ZR03 302 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 CDH26Q8IXH8 852 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF611Q8N823 705 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 GTF3AQ92664 365 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 SLC25A46Q96AG3 418 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 SORCS2Q96PQ0 1159 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 DCUN1D5Q9BTE7 237 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 MS4A5Q9H3V2 200 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 METTL17Q9H7H0 456 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 PPP1R3EQ9H7J1 279 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 CBLN4Q9NTU7 201 aa10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 CCDC59Q9P031 241 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 HEATR1Q9H583 2144 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-213ENST00000597325 PQLC2LA1A4F0 135 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF732B4DXR9 585 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 F5H5P2 479 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 H0YL77 283 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 MLNRO43193 412 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 TPD52L2O43399 206 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 RPS19P39019 145 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 SRP9P49458 86 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 KISS1Q15726 138 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 RAB11BQ15907 218 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF573Q86YE8 665 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 OR6M1Q8NGM8 313 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 AP3S1Q92572 193 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 SPACA5Q96QH8 159 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 S100A13Q99584 98 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 UQCC2Q9BRT2 126 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM160Q9NX00 188 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.77
SHKBP1-213ENST00000597325 A0A1B0GWJ7 208 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 LRP5LA4QPB2 252 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 A6NLC8 198 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 IFITM5A6NNB3 132 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 AIPO00170 330 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 SLC17A2O00624 439 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 CYB5AP00167 134 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 PLATP00750 562 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 ZNF182P17025 639 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 HTR2CP28335 458 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 CD200P41217 278 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 POU3F4P49335 361 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 PPOXP50336 477 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 CAPZA1P52907 286 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 CAV3P56539 151 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 DGUOKQ16854 277 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 CLEC12BQ2HXU8 276 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 PCGF3Q3KNV8 242 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 FAM209AQ5JX71 171 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 IDNKQ5T6J7 187 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 HES5Q5TA89 166 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 PRR14LQ5THK1 2151 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 AWAT2Q6E213 333 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 ZNF671Q8TAW3 534 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 DYNC2LI1Q8TCX1 351 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 TNFAIP8L1Q8WVP5 186 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 RFT1Q96AA3 541 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 GFI1Q99684 422 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 EGLN1Q9GZT9 426 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 DECR2Q9NUI1 292 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 STEAP1Q9UHE8 339 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 MRPS28Q9Y2Q9 187 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-213ENST00000597325 J3QT63 122 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 TMEM127O75204 238 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 GRPP07492 148 aa10.19□□□□□ -0.78
SHKBP1-213ENST00000597325 ADH4P08319 380 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms