RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 PQLC2LA1A4F0 135 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 NOTOA8MTQ0 251 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 B9A039 149 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 F5H5P2 479 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 PDCD5O14737 125 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SPRY3O43610 288 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 IGHV1-46P01743 117 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SOD3P08294 240 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SLC2A2P11168 524 aaPredicted RBP7.98□□□□□ -1.13
TRIM28-208ENST00000597172 PRKACBP22694 351 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 GPM6AP51674 278 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 HNRNPA0Q13151 305 aaKnown RBP7.98□□□□□ -1.13
TRIM28-208ENST00000597172 MAB21L1Q13394 359 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 OR8G1Q15617 311 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 KISS1Q15726 138 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 MOGQ16653 247 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 C1orf100Q5SVJ3 147 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 DDI2Q5TDH0 399 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 GLT8D1Q68CQ7 371 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 C11orf71Q6IPW1 123 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 C1QL2Q7Z5L3 287 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 WDR86Q86TI4 376 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 ANGPTL5Q86XS5 388 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 CDH26Q8IXH8 852 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 C11orf53Q8IXP5 236 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 MUC15Q8N387 334 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 FTMTQ8N4E7 242 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 C3orf56Q8N813 242 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 OR10AD1Q8NGE0 317 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 FBXW5Q969U6 566 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SPSB1Q96BD6 273 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 RNF170Q96K19 258 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 TECTBQ96PL2 329 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 HIST1H2AAQ96QV6 131 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 DCUN1D5Q9BTE7 237 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SLC22A4Q9H015 551 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 OR51I2Q9H344 312 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 CNTD2Q9H8S5 307 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 SLC7A11Q9UPY5 501 aa7.98□□□□□ -1.13
TRIM28-208ENST00000597172 A0A0B4J203 849 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ANXA2P2A6NMY6 339 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 IFITM5A6NNB3 132 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 C17orf100A8MU93 164 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 PTBP3O95758 552 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ERCC1P07992 297 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ADH4P08319 380 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 HCKP08631 526 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF93P35789 620 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CD200P41217 278 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 RBP2P50120 134 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 RORCP51449 518 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF81P51508 661 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 PSMD7P51665 324 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ATP1B3P54709 279 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 MTCP1P56278 107 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ZP1P60852 638 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CNN3Q15417 329 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 NKPD1Q17RQ9 610 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 HES5Q5TA89 166 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 SFXN4Q6P4A7 337 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 LHFPL2Q6ZUX7 228 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CALHM1Q8IU99 346 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 FBXL14Q8N1E6 418 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ZNF611Q8N823 705 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 NKAIN3Q8N8D7 197 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 OR2Z1Q8NG97 314 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 OR4D6Q8NGJ1 314 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 OR8S1Q8NH09 359 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 RFT1Q96AA3 541 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 FOXRED1Q96CU9 486 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 BORCS8Q96FH0 119 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 MICU1Q9BPX6 476 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ADAT1Q9BUB4 502 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 TRAF4Q9BUZ4 470 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 SLIRPQ9GZT3 109 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 NXF2Q9GZY0 626 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CXorf56Q9H5V9 222 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 METTL17Q9H7H0 456 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 ABCB9Q9NP78 766 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CYSLTR2Q9NS75 346 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 CBLN4Q9NTU7 201 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
TRIM28-208ENST00000597172 YLPM1P49750 1951 aaKnown RBP7.97□□□□□ -1.13
TRIM28-208ENST00000597172 IGHV3-64DA0A0J9YX35 117 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 PLSCR5A0PG75 271 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 OR5B21A6NL26 309 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 AIPO00170 330 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 SLC17A2O00624 439 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 MAGEB3O15480 346 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 SYNGR1O43759 233 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 PMELP40967 661 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 PTGFRP43088 359 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 OR3A4PP47883 348 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 CLDN12P56749 244 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 GNG3P63215 75 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 PDZK1IP1Q13113 114 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 MPPED2Q15777 294 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 PRR31Q5SQ13 230 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms