RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 KRT8P05787 483 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 NDUFB7P17568 137 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 KIR3DL2P43630 455 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 GABRA2P47869 451 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 PRSS35Q8N3Z0 413 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 PNKDQ8N490 385 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 TMEM86BQ8N661 226 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 CD177Q8N6Q3 437 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 TMEM185AQ8NFB2 350 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 OR10H4Q8NGA5 316 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 OR2T27Q8NH04 317 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 SDSLQ96GA7 329 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 MED30Q96HR3 178 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 NRIP2Q9BQI9 281 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 HES4Q9HCC6 221 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 USE1Q9NZ43 259 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 C1RLQ9NZP8 487 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 ZNRD1Q9P1U0 126 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
LIG1-212ENST00000596549 IGKV1-27A0A075B6S5 117 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 MPZP25189 248 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 TP53I3Q53FA7 332 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 HCP5Q6MZN7 132 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 SHISA2Q6UWI4 295 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 CMTM4Q8IZR5 234 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 ZNF671Q8TAW3 534 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 TRMT10AQ8TBZ6 339 aaKnown RBP10.69□□□□□ -0.7
LIG1-212ENST00000596549 NPRL2Q8WTW4 380 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 SSMEM1Q8WWF3 244 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 HRASLS5Q96KN8 279 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 MBOAT4Q96T53 435 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
LIG1-212ENST00000596549 LOC107986453A0A1B0GWG9 222 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 ANKRD61A6NGH8 418 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 RFPL4AA6NLU0 287 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 RFPL4AL1F8VTS6 287 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 J3QRE1 110 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 M0R1W7 72 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 SPRY1O43609 319 aaPredicted RBP10.68□□□□□ -0.7
LIG1-212ENST00000596549 NOS1APO75052 506 aaPredicted RBP10.68□□□□□ -0.7
LIG1-212ENST00000596549 SULT1C4O75897 302 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 SAA4P35542 130 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 IER3P46695 156 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 RAG2P55895 527 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 CDC42P60953 191 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 ERVK11-1P61568 191 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 TMED1Q13445 227 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 UBE2V2Q15819 145 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 TAF9Q16594 264 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 PRR31Q5SQ13 230 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 ANGPTL5Q86XS5 388 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 ZNF573Q86YE8 665 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 SGMS2Q8NHU3 365 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 WFDC12Q8WWY7 111 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 CHST5Q9GZS9 411 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 PLEKHA1Q9HB21 404 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 RASL12Q9NYN1 266 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 AASSQ9UDR5 926 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 POLDIP2Q9Y2S7 368 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 MMP24Q9Y5R2 645 aa10.68□□□□□ -0.7
LIG1-212ENST00000596549 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 F8VVB4 439 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 F8VWA3 439 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 NPFFO15130 113 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 SYT7O43581 403 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 GPR137BO60478 399 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 ENTPD6O75354 484 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 NDUFA7O95182 113 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 GABRB1P18505 474 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 ALDH3A2P51648 485 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 SRSF4Q08170 494 aaKnown RBP10.67□□□□□ -0.7
LIG1-212ENST00000596549 IL24Q13007 206 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 ZIK1Q3SY52 487 aaPredicted RBP10.67□□□□□ -0.7
LIG1-212ENST00000596549 FAM185AQ8N0U4 392 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 CBR4Q8N4T8 237 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 DYRK2Q92630 601 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 RFKQ969G6 155 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 PKIBQ9C010 78 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 IMPAD1Q9NX62 359 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 GNG8Q9UK08 70 aa10.67□□□□□ -0.7
LIG1-212ENST00000596549 FAM230AA0A1W2PPH8 454 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 NXPH2O95156 264 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 FBP1P09467 338 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 UBCP0CG48 685 aaKnown RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 NANOS3P60323 173 aaKnown RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 SNRPGP62308 76 aaKnown RBP10.66□□□□□ -0.7
LIG1-212ENST00000596549 ZNF273Q14593 569 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 ZFP1Q6P2D0 407 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
LIG1-212ENST00000596549 RDH10Q8IZV5 341 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms