RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NDUFB3O43676 98 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 XPNPEP2O43895 674 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 NOS1APO75052 506 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 RHBDL1O75783 438 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ZFPL1O95159 310 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ATP6V1G2O95670 118 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 LIPFP07098 398 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ACAA1P09110 424 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ATF1P18846 271 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 POC1AQ8NBT0 407 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 OR5D14Q8NGL3 314 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 TRMT10AQ8TBZ6 339 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ADAT3Q96EY9 351 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 CCL13Q99616 98 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 WDR13Q9H1Z4 485 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 DHDHQ9UQ10 334 aa14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 ANK3Q12955 4377 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-212ENST00000596163 OR2AT4A6NND4 320 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 DVL1O14640 695 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 ENSAO43768 121 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 CYB5AP00167 134 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 MPZP25189 248 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 RBP2P50120 134 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 GTF2A1P52655 376 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 PAX8Q06710 450 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 IL24Q13007 206 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 SMIM21Q3B7S5 101 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 LRRC10Q5BKY1 277 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 C6orf141Q5SZD1 244 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 OR2G6Q5TZ20 316 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 STUMQ69YW2 141 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 IZUMO2Q6UXV1 221 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 LHFPL2Q6ZUX7 228 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 AHSA2Q719I0 299 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 C1QL2Q7Z5L3 287 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 PRIMA1Q86XR5 153 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 SERPINA12Q8IW75 414 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 OR5T2Q8NGG2 359 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 NPRL2Q8WTW4 380 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 TSEN15Q8WW01 171 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 GATAD2BQ8WXI9 593 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 MYDGFQ969H8 173 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 SPSB1Q96BD6 273 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 PDCD1LG2Q9BQ51 273 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 NUDT16L1Q9BRJ7 211 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 SNTG1Q9NSN8 517 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 CTSZQ9UBR2 303 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 CLEC2DQ9UHP7 191 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 ERGIC3Q9Y282 383 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 NAV3Q8IVL0 2385 aa14.38□□□□□ -0.11
SHKBP1-212ENST00000596163 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 MYL12BO14950 172 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 NXPH2O95156 264 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 CD2P06729 351 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 PGA5P0DJD9 388 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 MYF6P23409 242 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 GABRA2P47869 451 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 MTCP1P56278 107 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 TAS2R43P59537 309 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 IL13RA1P78552 427 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 PAX2Q02962 417 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 CDK5R1Q15078 307 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 LAIR2Q6ISS4 152 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 ANGPTL5Q86XS5 388 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 MKXQ8IYA7 352 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 PNLDC1Q8NA58 520 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 OR51A4Q8NGJ6 313 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 OR10AC1Q8NH08 325 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 ANGPTL6Q8NI99 470 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 GPR148Q8TDV2 347 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 SEH1LQ96EE3 360 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 ANKRD60Q9BZ19 345 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 ZCCHC4Q9H5U6 513 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 TPRKBQ9Y3C4 175 aa14.37□□□□□ -0.11
SHKBP1-212ENST00000596163 OGG1O15527 345 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 SYNGR1O43759 233 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 ALX3O95076 343 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 AVPP01185 164 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 MT-ND2P03891 347 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 PPIAL4GP0DN37 164 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 AZGP1P25311 298 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 VHLP40337 213 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 ACP7Q6ZNF0 438 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 ZNF788Q6ZQV5 615 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 CALHM1Q8IU99 346 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 ST8SIA4Q92187 359 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 NRIP2Q9BQI9 281 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 RASSF4Q9H2L5 321 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 OPN4Q9UHM6 478 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
SHKBP1-212ENST00000596163 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 CDK1P06493 297 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 PSG2P11465 335 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 ARMCX4Q5H9R4 360 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 RNLSQ5VYX0 342 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 C1orf229Q6ZS94 237 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 BTN2A1Q7KYR7 527 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 Q8IYB0 196 aa14.35□□□□□ -0.11
SHKBP1-212ENST00000596163 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms