RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 HAAOP46952 286 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 MAB21L1Q13394 359 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF79Q15937 498 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 SPANXN2Q5MJ10 180 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 CDH24Q86UP0 819 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF611Q8N823 705 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 TMEM104Q8NE00 496 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 KCNG3Q8TAE7 436 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 AQP3Q92482 292 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 METTL9Q9H1A3 318 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 C14orf119Q9NWQ9 140 aa12.52□□□□□ -0.41
SHKBP1-211ENST00000595945 DSCAMO60469 2012 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A1W2PP11 408 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 FABP12A6NFH5 140 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 F5H5P2 479 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 SYNGR1O43759 233 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CDC14BO60729 498 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CTAG2O75638 210 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 KDM4BO94953 1096 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CD40LGP29965 261 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 MNDAP41218 407 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 IL24Q13007 206 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF154Q13106 437 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 MEX3BQ6ZN04 569 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 C11orf53Q8IXP5 236 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 MKXQ8IYA7 352 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CELF2-AS1Q8N7Q2 184 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 SCCPDHQ8NBX0 429 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 OR51F2Q8NH61 342 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CST11Q9H112 138 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 LPAR5Q9H1C0 372 aa12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-211ENST00000595945 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF780AO75290 641 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 TPPPO94811 219 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 GOSR1O95249 250 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 PLATP00750 562 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 ACAA1P09110 424 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 NR4A2P43354 598 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 ZNF81P51508 661 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 PPP5CP53041 499 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 RPS27AP62979 156 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 MZT1Q08AG7 82 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 GPR176Q14439 515 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 NKPD1Q17RQ9 610 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 SLC22A6Q4U2R8 563 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 ELP2Q6IA86 826 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 BAIAP2L2Q6UXY1 529 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 OR10K1Q8NGX5 313 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 ELMOD3Q96FG2 381 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 S100A16Q96FQ6 103 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 S100A13Q99584 98 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 SDHCQ99643 169 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 TM2D1Q9BX74 207 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 TMEM59Q9BXS4 323 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 CXorf56Q9H5V9 222 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 NKIRAS2Q9NYR9 191 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 MTCH1Q9NZJ7 389 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 RABL2AQ9UBK7 228 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 RABL2BQ9UNT1 228 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 UTP20O75691 2785 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 TENM4Q6N022 2769 aa12.5□□□□□ -0.41
SHKBP1-211ENST00000595945 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A0A6YYD4 124 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A0A6YYH2 397 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 A0A1W2PPR1 153 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 A6NJ64 397 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 FOXI3A8MTJ6 420 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 B9A039 149 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 J3QRK9 145 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 RAB27BO00194 218 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 CRTAPO75718 401 aaPredicted RBP12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 MPIG6BO95866 241 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 SFTPBP07988 381 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 CD55P08174 381 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 MGMTP16455 207 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 CDK2P24941 298 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 TALDO1P37837 337 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 PTH2RP49190 550 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 RSU1Q15404 277 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 SWI5Q1ZZU3 235 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 PRAMEF6Q5VXH4 476 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM131AQ6UXB0 335 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM89BQ8N5H3 189 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 OR2Z1Q8NG97 314 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 FAM46BQ96A09 425 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 Q96M66 194 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 DIRC2Q96SL1 478 aa12.49□□□□□ -0.41
SHKBP1-211ENST00000595945 ATG5Q9H1Y0 275 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms