RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CYSLTR2Q9NS75 346 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 EXTL2Q9UBQ6 330 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 RAB22AQ9UL26 194 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 JMJD1CQ15652 2540 aa11.13□□□□□ -0.63
SHKBP1-209ENST00000595803 FLNAP21333 2647 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 IGLV3-9A0A075B6K5 115 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 IGKV1-27A0A075B6S5 117 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 TMEM272A0A1B0GTI8 110 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 E7EQL1 145 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 H0YL77 283 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 PLATP00750 562 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 EIF4EP06730 217 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 NAT2P11245 290 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 BMP4P12644 408 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 SERPINF1P36955 418 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 HAAOP46952 286 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 PDZK1IP1Q13113 114 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 GPR176Q14439 515 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 TMEM255AQ5JRV8 349 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 METAP1DQ6UB28 335 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 FAM131AQ6UXB0 335 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 OR2W3Q7Z3T1 314 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 MKXQ8IYA7 352 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 CMTM4Q8IZR5 234 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 ZSCAN4Q8NAM6 433 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 SPATA3Q8NHX4 192 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 KCNG3Q8TAE7 436 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 RAB40AQ8WXH6 277 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 PHF21AQ96BD5 680 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 CISD1Q9NZ45 108 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-209ENST00000595803 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 TMEM210A6NLX4 147 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 DEFB108AA8MXU0 73 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 SPRY1O43609 319 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF780AO75290 641 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 KDM4BO94953 1096 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 HTR3BO95264 441 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 PLAUP00749 431 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 CSTBP04080 98 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 GRPP07492 148 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 INHBBP09529 407 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 RAB6AP20340 208 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ETV6P41212 452 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ALDH3B1P43353 468 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ZP1P60852 638 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 RSU1Q15404 277 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ADIPOQQ15848 244 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 FAM189A2Q15884 450 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 OR10K2Q6IF99 312 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 CRIP3Q6Q6R5 217 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 MEX3BQ6ZN04 569 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 Q6ZR03 302 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 C1QL2Q7Z5L3 287 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 DTX3Q8N9I9 347 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 PXT1Q8NFP0 134 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 OR2Z1Q8NG97 314 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 OR51F2Q8NH61 342 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 NEUROG1Q92886 237 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 PTX4Q96A99 478 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 FGF23Q9GZV9 251 aaPredicted RBP11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 CST11Q9H112 138 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 ABCG5Q9H222 651 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 OR51I2Q9H344 312 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 DLL4Q9NR61 685 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
SHKBP1-209ENST00000595803 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 LRP5LA4QPB2 252 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 TMEM14DPA8MWL7 114 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 F5H5P2 479 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 MLNRO43193 412 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 SIAH2O43255 324 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 SPRY3O43610 288 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 CRTAPO75718 401 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 MPIG6BO95866 241 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 ZNF81P51508 661 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 IL18Q14116 193 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 HAGHLQ6PII5 290 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 CALHM1Q8IU99 346 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 SAXO1Q8IYX7 474 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 OR4M1Q8NGD0 313 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 FAM46BQ96A09 425 aa11.1□□□□□ -0.63
SHKBP1-209ENST00000595803 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms