RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CST4P01036 141 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 ZNF708P17019 499 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 LURAP1LQ8IV03 231 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 RHBDD1Q8TEB9 315 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 CCDC74BQ96LY2 380 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 UCN2Q96RP3 112 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 NAA11Q9BSU3 229 aaPredicted RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 CEP192Q8TEP8 1941 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 NCOA6Q14686 2063 aaPredicted RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 LOC102725191A0A1B0GVB3 256 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 FIGNL2A6NMB9 653 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 DHRS7CA6NNS2 312 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 C1orf196B1AJZ1 125 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 G3V3Y1 287 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 SGCEO43556 437 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 OR8U9P0C7N5 309 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 CBR1P16152 277 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 ADH6P28332 368 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 ALDH3B1P43353 468 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 EIF2S3LQ2VIR3 472 aaKnown RBP14.42□□□□□ -0.1
LIG1-206ENST00000594067 SEMA6DQ8NFY4 1073 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 OR8U1Q8NH10 309 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 LYPD6BQ8NI32 183 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 SECTM1Q8WVN6 248 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 GNRHR2Q96P88 292 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 PIGQQ9BRB3 760 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 ZNF2Q9BSG1 426 aaPredicted RBP14.42□□□□□ -0.1
LIG1-206ENST00000594067 CHST5Q9GZS9 411 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 POMT1Q9Y6A1 747 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 SERPINE3A8MV23 424 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 UBE2CO00762 179 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 SMIM6P0DI80 62 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 CPT2P23786 658 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 PPT1P50897 306 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 Q6ZRG5 221 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 PPP1R3BQ86XI6 285 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 NABP1Q96AH0 204 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 SHDQ96IW2 340 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 CNTNAP3Q9BZ76 1288 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 GPR173Q9NS66 373 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 PLEKHJ1Q9NW61 149 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 WDFY3Q8IZQ1 3526 aa14.42□□□□□ -0.1
LIG1-206ENST00000594067 A0A0U1RQV5 110 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 TP53I11O14683 189 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 IFNA2P01563 188 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 S100A8P05109 93 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 RBMXP38159 391 aaKnown RBP14.41□□□□□ -0.1
LIG1-206ENST00000594067 SMCO1Q147U7 214 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 IAH1Q2TAA2 248 aaPredicted RBP14.41□□□□□ -0.1
LIG1-206ENST00000594067 RNF212Q495C1 297 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 HAS2Q92819 552 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 TM2D1Q9BX74 207 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 FSCN3Q9NQT6 498 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 OCIAD1Q9NX40 245 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 PLEK2Q9NYT0 353 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 NPIPA2E9PIF3 369 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 NPIPA3F8WFD2 350 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 M0R135 149 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 RPL12P30050 165 aaKnown RBP14.41□□□□□ -0.1
LIG1-206ENST00000594067 PRSS12P56730 875 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 H3F3AP84243 136 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 SNAI3Q3KNW1 292 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 RAET1LQ5VY80 246 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 PP6455Q8WZ26 134 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 TMEM54Q969K7 222 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 ZNF799Q96GE5 643 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 JSRP1Q96MG2 331 aaPredicted RBP14.41□□□□□ -0.1
LIG1-206ENST00000594067 RPS10P5Q9NQ39 176 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 GSN-AS1Q9NRJ2 163 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 MEMO1Q9Y316 297 aa14.41□□□□□ -0.1
LIG1-206ENST00000594067 A0A1W2PPE3 182 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 FABP1P07148 127 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 CD63P08962 238 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 ZNF806P0C7X5 589 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 CHAF1BQ13112 559 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 C10orf128Q5T292 105 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 SLC16A14Q7RTX9 510 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 ZNF837Q96EG3 531 aaPredicted RBP14.4□□□□□ -0.1
LIG1-206ENST00000594067 C1orf123Q9NWV4 160 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 LY6G6EA0A0G2JKS1 128 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 DHHO43323 396 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 ANGPTL7O43827 346 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 TMEM225BP0DP42 221 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 AGAP20933 346 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 PCOLCEQ15113 449 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 NSUN5P2Q63ZY6 315 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 ZNF581Q9P0T4 197 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 KPTNQ9Y664 436 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 U3KQA8 63 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 EML6Q6ZMW3 1958 aa14.4□□□□□ -0.1
LIG1-206ENST00000594067 MSTNO14793 375 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 ZNF205O95201 554 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 GAPDHP04406 335 aaKnown RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 S100A6P06703 90 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 CCL3P10147 92 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 NR2C1P13056 603 aa14.39□□□□□ -0.11
LIG1-206ENST00000594067 POLR2GP62487 172 aaKnown RBP eCLIP14.39□□□□□ -0.11
LIG1-206ENST00000594067 SURF2Q15527 256 aaPredicted RBP14.39□□□□□ -0.11
LIG1-206ENST00000594067 MRPL14Q6P1L8 145 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms