RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 TRAF3IP2O43734 574 aaPredicted RBP8.64□□□□□ -1.03
LIG3-216ENST00000593099 ZFPL1O95159 310 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 FABP5Q01469 135 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 PEA15Q15121 130 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 MS4A18Q3C1V0 323 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 RNF133Q8WVZ7 376 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 ARL6Q9H0F7 186 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 RIMS4Q9H426 269 aaPredicted RBP8.64□□□□□ -1.03
LIG3-216ENST00000593099 NARFLQ9H6Q4 476 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 SAP30LQ9HAJ7 183 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 C1orf123Q9NWV4 160 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 UGT2A1Q9Y4X1 527 aa8.64□□□□□ -1.03
LIG3-216ENST00000593099 ALPK2Q86TB3 2170 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 CDRT15L2A8MXV6 281 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ANGPTL7O43827 346 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ONECUT2O95948 504 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 PGA4P0DJD7 388 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 PGA3P0DJD8 388 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 OR8B12Q8NGG6 310 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 LRRC29Q8WV35 223 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 SECTM1Q8WVN6 248 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 HEATR5BQ9P2D3 2071 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 IFITM5A6NNB3 132 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ADRB1P08588 477 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 MGMTP16455 207 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 CD34P28906 385 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 HES1Q14469 280 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ACSF3Q4G176 576 aaPredicted RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 AADACL3Q5VUY0 350 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 OR1K1Q8NGR3 316 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 NOX3Q9HBY0 568 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 PROB1E7EW31 1015 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 K7ERU9 68 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 CDK2P24941 298 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 RPS19P39019 145 aaKnown RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 GSK3AP49840 483 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 GP2P55259 537 aaKnown RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 SLC25A47Q6Q0C1 308 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ZNF709Q8N972 641 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 BEST4Q8NFU0 473 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ST8SIA4Q92187 359 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 CNTNAP3BQ96NU0 1288 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 C2orf16Q68DN1 1984 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 SPRY1O43609 319 aaPredicted RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 IFNA2P01563 188 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ACSM4P0C7M7 580 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 CPN1P15169 458 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 AGTR1P30556 359 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 SUCLG1P53597 346 aaKnown RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 GSG1LQ6UXU4 331 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 C17orf78Q8N4C9 275 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 C22orf15Q8WYQ4 148 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 SLAMF9Q96A28 289 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 ZNF275Q9NSD4 429 aaPredicted RBP8.63□□□□□ -1.03
LIG3-216ENST00000593099 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
LIG3-216ENST00000593099 MT-CO2P00403 227 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 TLE4Q04727 773 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SFRP5Q5T4F7 317 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 Q6ZT83 130 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 POM121Q96HA1 1249 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 WDYHV1Q96HA8 205 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 IGLV3-32A0A0A0MS00 114 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 PLPP2O43688 288 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 PSG4Q00888 419 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 KISS1Q15726 138 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 MSMO1Q15800 293 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SLC25A53Q5H9E4 307 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SLC25A30Q5SVS4 291 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 NSUN5P2Q63ZY6 315 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 ADAM5Q6NVV9 412 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 ORAI1Q96D31 301 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SNRNP40Q96DI7 357 aaKnown RBP8.62□□□□□ -1.03
LIG3-216ENST00000593099 ZDHHC11Q9H8X9 412 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 OTOGLQ3ZCN5 2332 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 GBF1Q92538 1859 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 TRGV10A0A0A0MS01 117 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 TRAV1-2A0A0B4J238 106 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 NPIPB13A6NJU9 1138 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 NPIPB4C9JG80 1138 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SLC17A2O00624 439 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
LIG3-216ENST00000593099 TFP02787 698 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 EPHA1P21709 976 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 HIST2H3PS2Q5TEC6 136 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
LIG3-216ENST00000593099 OR10J5Q8NHC4 309 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 SLC25A46Q96AG3 418 aa8.62□□□□□ -1.03
LIG3-216ENST00000593099 COPS3Q9UNS2 423 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms