RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZP1P60852 638 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 SPCS2Q15005 226 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 CEACAM21Q3KPI0 293 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 HES5Q5TA89 166 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 ZBTB37Q5TC79 503 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 LYPD6Q86Y78 171 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 SERPINA12Q8IW75 414 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 SCCPDHQ8NBX0 429 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 OR4D6Q8NGJ1 314 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 OR10K1Q8NGX5 313 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 PP6455Q8WZ26 134 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 SLAMF9Q96A28 289 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 DIRC2Q96SL1 478 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 MICU1Q9BPX6 476 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 RTL8AQ9BWD3 113 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 OR51I2Q9H344 312 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 SAP30LQ9HAJ7 183 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 GCM1Q9NP62 436 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 ZNF581Q9P0T4 197 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 MPC1Q9Y5U8 109 aa8.12□□□□□ -1.11
DDX39A-220ENST00000593008 FN1P02751 2386 aaKnown RBP8.12□□□□□ -1.11
DDX39A-220ENST00000593008 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 A0A096LNT2 108 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 A0A1B0GW55 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 H3BMQ9 156 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 RP2O75695 350 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 GATBO75879 557 aaKnown RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 CDRT1O95170 752 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 PTBP3O95758 552 aaKnown RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SERPINA3P01011 423 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ADH4P08319 380 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 CSF3P09919 207 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L2P0CJ85 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L3P0CJ86 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L4P0CJ87 422 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L5P0CJ88 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L6P0CJ89 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L7P0CJ90 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SLC25A16P16260 332 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ZNF12P17014 697 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SRMP19623 302 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 BDKRB2P30411 391 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SDC2P34741 201 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 HAAOP46952 286 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 NPBWR2P48146 333 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SERPINB10P48595 397 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SNU13P55769 128 aaKnown RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 PPP3R1P63098 170 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 P2RY14Q15391 338 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 CNN3Q15417 329 aaKnown RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 TRAM1Q15629 374 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 AVPI1Q5T686 147 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 WDR82Q6UXN9 313 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SLC25A26Q70HW3 274 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ANKRD13BQ86YJ7 626 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 JAGN1Q8N5M9 183 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 CCDC54Q8NEL0 328 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ISOC1Q96CN7 298 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 BORCS8Q96FH0 119 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 PIMREGQ9BSJ6 248 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 FAM192AQ9GZU8 254 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SLC22A4Q9H015 551 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 DUX4Q9UBX2 424 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 SSR3Q9UNL2 185 aa8.11□□□□□ -1.11
DDX39A-220ENST00000593008 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
DDX39A-220ENST00000593008 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TANC2Q9HCD6 1990 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 LRP5LA4QPB2 252 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 OR5B21A6NL26 309 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 AKR7A2O43488 359 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 OCMP0CE72 109 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 BCL3P20749 454 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TNFSF4P23510 183 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 MAPK3P27361 379 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 FGF9P31371 208 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 NR4A2P43354 598 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 CEBPDP49716 269 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 FUT6P51993 359 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 MTCP1P56278 107 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 GNG3P63215 75 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 KISS1Q15726 138 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TMEM249Q2WGJ8 235 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 OR10K2Q6IF99 312 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 GCSAMQ8N6F7 178 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 OR5D14Q8NGL3 314 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 TNFAIP8L1Q8WVP5 186 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 NEU4Q8WWR8 484 aaPredicted RBP8.1□□□□□ -1.11
DDX39A-220ENST00000593008 AQP3Q92482 292 aa8.1□□□□□ -1.11
DDX39A-220ENST00000593008 CCL17Q92583 94 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms