RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 C5orf63A6NC05 138 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 ZNF729A6NN14 1252 aaPredicted RBP15.75■□□□□ 0.11
SPC24-206ENST00000592540 XRCC2O43543 280 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 EFNA2O43921 213 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 YIF1AO95070 293 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 HOXA5P20719 270 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 FBLP22087 321 aaKnown RBP15.75■□□□□ 0.11
SPC24-206ENST00000592540 PPA1Q15181 289 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 SP6Q3SY56 376 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 GPR157Q5UAW9 335 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 RTL6Q6ICC9 239 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 KLHDC7BQ96G42 594 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 HDHD3Q9BSH5 251 aaPredicted RBP15.75■□□□□ 0.11
SPC24-206ENST00000592540 VN1R1Q9GZP7 353 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 UCK1Q9HA47 277 aa15.75■□□□□ 0.11
SPC24-206ENST00000592540 NDUFS6O75380 124 aaKnown RBP15.74■□□□□ 0.11
SPC24-206ENST00000592540 DIRAS3O95661 229 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 FOSL2P15408 326 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 ZNF43P17038 809 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 CHATP28329 748 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 CCR5P51681 352 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 PIGPP57054 158 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 CARD17Q5XLA6 110 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 SLC25A47Q6Q0C1 308 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 PLXDC2Q6UX71 529 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 LIME1Q9H400 295 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 ZDHHC8Q9ULC8 765 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 KCNIP3Q9Y2W7 256 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 PUS1Q9Y606 427 aaKnown RBP eCLIP15.74■□□□□ 0.11
SPC24-206ENST00000592540 A0A1B0GV50 99 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 A0A1B0GW64 132 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 RD3LP0DJH9 198 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 PPP1CCP36873 323 aaKnown RBP15.74■□□□□ 0.11
SPC24-206ENST00000592540 RNF4P78317 190 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 MYBPHQ13203 477 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 EIF3IQ13347 325 aaKnown RBP15.74■□□□□ 0.11
SPC24-206ENST00000592540 KIAA0141Q14154 515 aaPredicted RBP15.74■□□□□ 0.11
SPC24-206ENST00000592540 TMEM187Q14656 261 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 SLC16A14Q7RTX9 510 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 HSD17B11Q8NBQ5 300 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 LYZL4Q96KX0 146 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 S100A13Q99584 98 aa15.74■□□□□ 0.11
SPC24-206ENST00000592540 ELL3Q9HB65 397 aaPredicted RBP15.74■□□□□ 0.11
SPC24-206ENST00000592540 RTTNQ86VV8 2226 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 OR5H8P0DN80 308 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 FCGR2AP12318 317 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 DRD1P21728 446 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 RPS10P46783 165 aaKnown RBP15.73■□□□□ 0.11
SPC24-206ENST00000592540 SUMO3P55854 103 aaPredicted RBP15.73■□□□□ 0.11
SPC24-206ENST00000592540 UBE2V2Q15819 145 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 SOHLH1Q5JUK2 328 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 LFNGQ8NES3 379 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 PLEKHJ1Q9NW61 149 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 ANXA10Q9UJ72 324 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 CYP8B1Q9UNU6 501 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 IFITM10A6NMD0 228 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 OR5AC1P0C628 307 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 GABRR1P24046 479 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 NHLH2Q02577 135 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 LYZL2Q7Z4W2 148 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 SUMF2Q8NBJ7 301 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 SLC38A9Q8NBW4 561 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 FAM213BQ8TBF2 198 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 STT3BQ8TCJ2 826 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 MR1Q95460 341 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 PGAM5Q96HS1 289 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 RARRES2Q99969 163 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 NAA60Q9H7X0 242 aa15.73■□□□□ 0.11
SPC24-206ENST00000592540 IGHV3-20A0A0C4DH32 117 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 MSTNO14793 375 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 TMEM225BP0DP42 221 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 CDX1P47902 265 aaPredicted RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 GRB2P62993 217 aaKnown RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 SMAD4Q13485 552 aaKnown RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 C9orf152Q5JTZ5 239 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 C1orf189Q5VU69 101 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 TMEM182Q6ZP80 229 aaPredicted RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 OR1L3Q8NH93 324 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 THAP3Q8WTV1 239 aaPredicted RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 TOMM40LQ969M1 308 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 CHRDQ9H2X0 955 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 TREM2Q9NZC2 230 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 SZT2Q5T011 3432 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 H7C1Q1 480 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 K7N7A8 449 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 TRAF3IP2O43734 574 aaPredicted RBP15.72■□□□□ 0.11
SPC24-206ENST00000592540 SLC34A2O95436 690 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 OPN1LWP04000 364 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 PYY3Q5JQD4 70 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 LRRC18Q8N456 261 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 MUCL1Q96DR8 90 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 GALNT14Q96FL9 552 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 ZDHHC12Q96GR4 267 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 PFDN5Q99471 154 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 PIAS3Q9Y6X2 628 aa15.72■□□□□ 0.11
SPC24-206ENST00000592540 IGLV3-1P01715 115 aa15.71■□□□□ 0.11
SPC24-206ENST00000592540 IL13RA2Q14627 380 aa15.71■□□□□ 0.11
SPC24-206ENST00000592540 KCNMB1Q16558 191 aa15.71■□□□□ 0.11
SPC24-206ENST00000592540 OR52M1Q8NGK5 317 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms