RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ACKR4Q9NPB9 350 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 EHFQ9NZC4 300 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 IL36GQ9NZH8 169 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 HSF4Q9ULV5 492 aa13.65□□□□□ -0.22
MBD1-227ENST00000592060 PCNX2A6NKB5 2137 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 ZNF503-AS2A6NEH8 195 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 KLRC4-KLRK1H3BQV0 150 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 SDCBPO00560 298 aaPredicted RBP13.64□□□□□ -0.23
MBD1-227ENST00000592060 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
MBD1-227ENST00000592060 PLATP00750 562 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 SERPINA5P05154 406 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 OR3A2P47893 321 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 COMMD7Q86VX2 200 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 TMEM17Q86X19 198 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 PXT1Q8NFP0 134 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 OR6K3Q8NGY3 331 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 SEC22AQ96IW7 307 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 TECTBQ96PL2 329 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 RTBDNQ9BSG5 229 aaPredicted RBP13.64□□□□□ -0.23
MBD1-227ENST00000592060 HDHD3Q9BSH5 251 aaPredicted RBP13.64□□□□□ -0.23
MBD1-227ENST00000592060 PDCD10Q9BUL8 212 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 PPA2Q9H2U2 334 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 PLEKHJ1Q9NW61 149 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 ZNF581Q9P0T4 197 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 KIF25Q9UIL4 384 aa13.64□□□□□ -0.23
MBD1-227ENST00000592060 A0A096LPE4 126 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 A0A1W2PPZ6 126 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 RRP8O43159 456 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 SFT2D2O95562 160 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ACTL6AO96019 429 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 COX5BP10606 129 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 CHATP28329 748 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 CALCRP30988 508 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 FUT6P51993 359 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 P2RX3P56373 397 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 RAB14P61106 215 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 RNPS1Q15287 305 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 NKAPLQ5M9Q1 402 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 PLCXD3Q63HM9 321 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 RPUSD3Q6P087 351 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 MOB3CQ70IA8 216 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ZNF546Q86UE3 836 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 PPP1R1CQ8WVI7 109 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 SCGB3A2Q96PL1 93 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 TNFSF18Q9UNG2 199 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ZNF407Q9C0G0 2248 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ARGFXA6NJG6 315 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 HLA-HP01893 362 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 CD46P15529 392 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ATP1B3P54709 279 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 SUPT4H1P63272 117 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 PDZK1IP1Q13113 114 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 TGIF1Q15583 401 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 TAF9Q16594 264 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 CHRFAM7AQ494W8 412 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 KCTD9Q7L273 389 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 NUFIP2Q7Z417 695 aaKnown RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 MARVELD3Q96A59 401 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 ZNF701Q9NV72 531 aaPredicted RBP13.63□□□□□ -0.23
MBD1-227ENST00000592060 COMMD9Q9P000 198 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 AK3Q9UIJ7 227 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
MBD1-227ENST00000592060 TNRC6AQ8NDV7 1962 aaKnown RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 RRASP10301 218 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 BAMBIQ13145 260 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 ZNF345Q14585 488 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 TOR2AQ5JU69 321 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 ZNF660Q6AZW8 331 aaPredicted RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 KCNRGQ8N5I3 272 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 ZSCAN4Q8NAM6 433 aaPredicted RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 SCARB1Q8WTV0 552 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 PIGCQ92535 297 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 WBP1Q96G27 269 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 KNTC1P50748 2209 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 A0A0D9SG52 128 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 RNF222A6NCQ9 220 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SS18L1O75177 396 aaPredicted RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 PI3P19957 117 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SOX8P57073 446 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SLC10A1Q14973 349 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SURF2Q15527 256 aaPredicted RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 PIGYQ3MUY2 71 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 ALKAL2Q6UX46 152 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 RFPL4BQ6ZWI9 263 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SLC51BQ86UW2 128 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 ANGPTL6Q8NI99 470 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 SULT4A1Q9BR01 284 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 FAAP24Q9BTP7 215 aa13.62□□□□□ -0.23
MBD1-227ENST00000592060 REPIN1Q9BWE0 567 aaKnown RBP13.62□□□□□ -0.23
MBD1-227ENST00000592060 PARD6AQ9NPB6 346 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms