RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 DAZAP1Q96EP5 407 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 MCRIP2Q9BUT9 160 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 PECRQ9BY49 303 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 FGF20Q9NP95 211 aaPredicted RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 PTTG2Q9NZH5 202 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CCDC59Q9P031 241 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 RLFQ13129 1914 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 KNTC1P50748 2209 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 GOLGA4Q13439 2230 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 A0A0G2JLM5 398 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF701M0R085 212 aaPredicted RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 TIMM23O14925 209 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ZG16O60844 167 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 LILRA1O75019 489 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 KLF7O75840 302 aaPredicted RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 GAAP10253 952 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 RPS4Y1P22090 263 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 RPL31P62899 125 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SELPLGQ14242 412 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CLEC12BQ2HXU8 276 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 TEX30Q5JUR7 227 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 C10orf128Q5T292 105 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CALHM1Q8IU99 346 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CCDC28AQ8IWP9 274 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SPAG16Q8N0X2 631 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 LINC01356Q8N9X3 169 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 APCDD1LQ8NCL9 501 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 MDS2Q8NDY4 140 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 OR8H1Q8NGG4 311 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CNIH3Q8TBE1 160 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 DYNC2LI1Q8TCX1 351 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 C12orf43Q96C57 262 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 RNF2Q99496 336 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 WIPI2Q9Y4P8 454 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ARID2Q68CP9 1835 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SLC2A10O95528 541 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 KNG1P01042 644 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 SRMP19623 302 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 CRYGSP22914 178 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 HTR1DP28221 377 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 HMGA2P52926 109 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF85Q03923 595 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 PPP1R8Q12972 351 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 TBPL2Q6SJ96 375 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 OR52N4Q8NGI2 321 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 MOB3AQ96BX8 217 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 AK6Q9Y3D8 172 aaKnown RBP5.51□□□□□ -1.53
SMAD4-212ENST00000591126 MIA3Q5JRA6 1907 aa5.51□□□□□ -1.53
SMAD4-212ENST00000591126 ZAR1LA6NP61 321 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 OOSP1A8MZH6 123 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 E9PQ18 207 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 J3KTA2 159 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 CORTO00230 105 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SELENOFO60613 162 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 CFDP00746 253 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 IGHMP01871 453 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 H2AFB2P0C5Z0 115 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF181Q2M3W8 571 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 GLYATL3Q5SZD4 288 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SPATA46Q5T0L3 261 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 RHOXF1Q8NHV9 184 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SECTM1Q8WVN6 248 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SMIM19Q96E16 107 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ASPDHA6ND91 283 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 IQCF6A8MYZ5 107 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 HAND1O96004 215 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 SELENOPP49908 381 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF136P52737 540 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 GNB1P62873 340 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 FAM106AQ4KMX7 169 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 HIKESHIQ53FT3 197 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 H3F3CQ6NXT2 135 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 FUNDC1Q8IVP5 155 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 OR56B4Q8NH76 319 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 OR51I2Q9H344 312 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZDHHC11Q9H8X9 412 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 MMP26Q9NRE1 261 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PLEKHB1Q9UF11 243 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 NUBP2Q9Y5Y2 271 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PPIAL4CA0A0B4J2A2 164 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 HMX2A2RU54 273 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 XKRY2A2RUG3 117 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZNF729A6NN14 1252 aaPredicted RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PDCD6O75340 191 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 TIAF1O95411 115 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 TFAP2AP05549 437 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PPIAL4GP0DN37 164 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 OMGP23515 440 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 COX7A1P24310 79 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 PCBP3P57721 371 aaKnown RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 ZFP69Q49AA0 526 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 C3orf56Q8N813 242 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 OR2G2Q8NGZ5 317 aa5.5□□□□□ -1.53
SMAD4-212ENST00000591126 MRPL24Q96A35 216 aaKnown RBP5.5□□□□□ -1.53
SMAD4-212ENST00000591126 TSPAN32Q96QS1 320 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms