RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 OR10Z1Q8NGY1 313 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 RAB1CQ92928 201 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 FOXRED1Q96CU9 486 aaPredicted RBP11.48□□□□□ -0.57
VMP1-210ENST00000589823 TIMD4Q96H15 378 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 KCTD7Q96MP8 289 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 METTL17Q9H7H0 456 aaPredicted RBP11.48□□□□□ -0.57
VMP1-210ENST00000589823 ITGB1BP2Q9UKP3 347 aa11.48□□□□□ -0.57
VMP1-210ENST00000589823 ITPR2Q14571 2701 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 SYNGR1O43759 233 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 RHBDL1O75783 438 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 TMEM225BP0DP42 221 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 PSMD7P51665 324 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 LSM3P62310 102 aaKnown RBP11.47□□□□□ -0.57
VMP1-210ENST00000589823 PDZK1IP1Q13113 114 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 ANKRD13BQ86YJ7 626 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 OR5D18Q8NGL1 313 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 C10orf105Q8TEF2 133 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 SLAMF9Q96A28 289 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 S100A13Q99584 98 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 DCAF16Q9NXF7 216 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
VMP1-210ENST00000589823 PPIAL4EA0A075B759 164 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 SRRM5B3KS81 715 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 PPIAL4DF5H284 164 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 TRAPPC2LH3BP13 241 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 AKR7A2O43488 359 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
VMP1-210ENST00000589823 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 ADRA2CP18825 462 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 RAB3BP20337 219 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 GLRA1P23415 457 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 GIFP27352 417 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 CD80P33681 288 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 MTNR1BP49286 362 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 GMFBP60983 142 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 HNRNPA0Q13151 305 aaKnown RBP11.46□□□□□ -0.57
VMP1-210ENST00000589823 RIN1Q13671 783 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 RNF144BQ7Z419 303 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 CLVS1Q8IUQ0 354 aaPredicted RBP11.46□□□□□ -0.57
VMP1-210ENST00000589823 SAXO1Q8IYX7 474 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 ZSCAN4Q8NAM6 433 aaPredicted RBP11.46□□□□□ -0.57
VMP1-210ENST00000589823 POC1AQ8NBT0 407 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 OR51F2Q8NH61 342 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 CEP19Q96LK0 163 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 UQCC2Q9BRT2 126 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 CENPOQ9BU64 300 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 SMURF1Q9HCE7 757 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 AK6Q9Y3D8 172 aaKnown RBP11.46□□□□□ -0.57
VMP1-210ENST00000589823 WIPI2Q9Y4P8 454 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 PPIAL4AQ9Y536 164 aa11.46□□□□□ -0.57
VMP1-210ENST00000589823 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
VMP1-210ENST00000589823 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ISPDA4D126 451 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 NOS1APO75052 506 aaPredicted RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 NXPH2O95156 264 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 LHBP01229 141 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ACAA1P09110 424 aaPredicted RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 SLC25A16P16260 332 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 RBMXP38159 391 aaKnown RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 PTGFRP43088 359 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 RANBP1P43487 201 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 OR3A4PP47883 348 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ZP1P60852 638 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 BTG1P62324 171 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 KCNJ8Q15842 424 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 AVPI1Q5T686 147 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 TPRA1Q86W33 373 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 Q8IYB0 196 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 PXT1Q8NFP0 134 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ZNF488Q96MN9 340 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 NKX3-1Q99801 234 aaPredicted RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 METTL9Q9H1A3 318 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 RNF167Q9H6Y7 350 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ELL3Q9HB65 397 aaPredicted RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 RASL12Q9NYN1 266 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 MTCH1Q9NZJ7 389 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 DNAJB11Q9UBS4 358 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ING4Q9UNL4 249 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 MRPS28Q9Y2Q9 187 aaKnown RBP11.45□□□□□ -0.58
VMP1-210ENST00000589823 V9GY05 133 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 ARID1AO14497 2285 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 DYSFO75923 2080 aa11.45□□□□□ -0.58
VMP1-210ENST00000589823 PDZD2O15018 2839 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
VMP1-210ENST00000589823 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 TRAV38-1A0A0B4J264 116 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 OOEPA6NGQ2 149 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 LGALS8O00214 317 aa11.44□□□□□ -0.58
VMP1-210ENST00000589823 WNT9BO14905 357 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms