RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 EHFQ9NZC4 300 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TCFL5Q9UL49 500 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TIMM10BQ9Y5J6 103 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 A0A0A6YYD4 124 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 DBX1A6NMT0 343 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 G3V3Y1 287 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TEX46H3BTG2 121 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CCSO14618 274 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TRAPPC6AO75865 159 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 HPP00738 406 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 RLN2P04090 185 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SERPINA5P05154 406 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CRHP06850 196 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 FGF2P09038 288 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TPT1P13693 172 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 TCN2P20062 427 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OTX2P32243 289 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SERPINF1P36955 418 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 RBP2P50120 134 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 LUMP51884 338 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CHAF1BQ13112 559 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SNTB1Q13884 538 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 UBE2V2Q15819 145 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 EIF5AL1Q6IS14 154 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 PLXDC2Q6UX71 529 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 AAED1Q7RTV5 226 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 C1orf210Q8IVY1 113 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR5D18Q8NGL1 313 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR1S1Q8NH92 325 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR1F12Q8NHA8 337 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 NPRL2Q8WTW4 380 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 DCUN1D4Q92564 292 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CPNE4Q96A23 557 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 NTNG2Q96CW9 530 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 MRPS24Q96EL2 167 aaKnown RBP6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CXorf58Q96LI9 332 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 PECRQ9BY49 303 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 REG4Q9BYZ8 158 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 PROK2Q9HC23 129 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 CRLF2Q9HC73 371 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 SLC7A11Q9UPY5 501 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 KCNIP3Q9Y2W7 256 aa6.47□□□□□ -1.37
ZNF540-206ENST00000589117 OR6C6A6NF89 314 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 BET1O15155 118 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 LCATP04180 440 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 PGAM2P15259 253 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 CNR1P21554 472 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ACP1P24666 158 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 RBMXP38159 391 aaKnown RBP6.46□□□□□ -1.38
ZNF540-206ENST00000589117 NAAAQ02083 359 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ATXN7L3Q14CW9 347 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-206ENST00000589117 SGPP2Q8IWX5 399 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ZIC4Q8N9L1 334 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 MRGPRFQ96AM1 343 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 FBXO17Q96EF6 278 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 BORCS8Q96FH0 119 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 REEP6Q96HR9 211 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 LYZL4Q96KX0 146 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 PIGMQ9H3S5 423 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 C5orf66Q9H5L9 145 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ZC4H2Q9NQZ6 224 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF701Q9NV72 531 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-206ENST00000589117 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 ABI3Q9P2A4 366 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 MBD2Q9UBB5 411 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 BOKQ9UMX3 212 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-206ENST00000589117 CSAG2Q9Y5P2 127 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 PI4KAP42356 2102 aa6.46□□□□□ -1.38
ZNF540-206ENST00000589117 TEX13DA0A0J9YY54 714 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 NUDT19A8MXV4 375 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SMAD9O15198 467 aaKnown RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 IFNA21P01568 189 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SERPINA7P05543 415 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 KLK2P20151 261 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 ADMP35318 185 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 AIMP2Q13155 320 aaKnown RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SMCO1Q147U7 214 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 NRN1LQ496H8 165 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 ACER2Q5QJU3 275 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 PHYHD1Q5SRE7 291 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 UQCC3Q6UW78 93 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 CLEC18BQ6UXF7 455 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 MOB3CQ70IA8 216 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 YRDCQ86U90 279 aaKnown RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 OR2I1PQ8NGU4 316 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 OR2V1Q8NHB1 315 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 SGK3Q96BR1 496 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 LIN37Q96GY3 246 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-206ENST00000589117 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM38BQ9NVV0 291 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 PARPBPQ9NWS1 579 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 B4GALT7Q9UBV7 327 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 HSF4Q9ULV5 492 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 TRBV6-7A0A0A0MS04 114 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 A0A1W2PP11 408 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 TAAR5O14804 337 aa6.45□□□□□ -1.38
ZNF540-206ENST00000589117 RRP8O43159 456 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms