RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CSTBP04080 98 aaKnown RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 EIF4EP06730 217 aaKnown RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 UBBP0CG47 229 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ELK1P19419 428 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 SRP9P49458 86 aaKnown RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 EFNB2P52799 333 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ART1P52961 327 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 LSAMPQ13449 338 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 MKXQ8IYA7 352 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ITLN1Q8WWA0 313 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 C1orf147Q96MC9 270 aaPredicted RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 MS4A5Q9H3V2 200 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 BANF2Q9H503 90 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 A0A1W2PP11 408 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 J3QT63 122 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 MPIG6BO95866 241 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 CD200P41217 278 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 SCAND1P57086 179 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 CCL8P80075 99 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 SWI5Q1ZZU3 235 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 SPRNQ5BIV9 151 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 UBE2NLQ5JXB2 153 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ZNF826PQ6ZT77 177 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ZSCAN4Q8NAM6 433 aaPredicted RBP12.3□□□□□ -0.44
NPC1-207ENST00000588867 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 PXT1Q8NFP0 134 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 AQP3Q92482 292 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 PKIBQ9C010 78 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 CST11Q9H112 138 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
NPC1-207ENST00000588867 TRAPPC2LH3BP13 241 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 COL8A1P27658 744 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 NPBWR2P48146 333 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 IL24Q13007 206 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 UNC119Q13432 240 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 SLC25A38Q96DW6 304 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 ZNF488Q96MN9 340 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 DIRC2Q96SL1 478 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
NPC1-207ENST00000588867 ATG5Q9H1Y0 275 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 DECR2Q9NUI1 292 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 RHBDL2Q9NX52 303 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 MTCH1Q9NZJ7 389 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 RAB22AQ9UL26 194 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 CHD3Q12873 2000 aaKnown RBP12.29□□□□□ -0.44
NPC1-207ENST00000588867 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
NPC1-207ENST00000588867 hCG_1807616A0A1W2PRN6 198 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 LDLRAD4O15165 306 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CTAG2O75638 210 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 KDM4BO94953 1096 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 GOSR1O95249 250 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 APOA1P02647 267 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 SFTPBP07988 381 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 SOD3P08294 240 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 BCL3P20749 454 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 GMFBP60983 142 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 QRFPP83859 136 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 GPR176Q14439 515 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 METAP1DQ6UB28 335 aaPredicted RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 ASCL4Q6XD76 172 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 LRRC28Q86X40 367 aaPredicted RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 C11orf53Q8IXP5 236 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 POLDIP2Q9Y2S7 368 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 COL12A1Q99715 3063 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CACNA1DQ01668 2161 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CDC14BO60729 498 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 ZNF780AO75290 641 aaPredicted RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 MPZP25189 248 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 TALDO1P37837 337 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 SPANXN2Q5MJ10 180 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 OR2W3Q7Z3T1 314 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 MOGAT3Q86VF5 341 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 SAXO1Q8IYX7 474 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 TMEM59Q9BXS4 323 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 CLEC4MQ9H2X3 399 aaPredicted RBP12.28□□□□□ -0.44
NPC1-207ENST00000588867 TREM2Q9NZC2 230 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 EXTL2Q9UBQ6 330 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 ARFGEF3Q5TH69 2177 aa12.28□□□□□ -0.44
NPC1-207ENST00000588867 FAM221AA4D161 298 aa12.27□□□□□ -0.44
NPC1-207ENST00000588867 C3orf80F5H4A9 247 aa12.27□□□□□ -0.44
NPC1-207ENST00000588867 F8VVB4 439 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms