RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 NKAPLQ5M9Q1 402 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ELP2Q6IA86 826 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 H3F3CQ6NXT2 135 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 CLEC18BQ6UXF7 455 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 IL34Q6ZMJ4 242 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 BAP18Q8IXM2 172 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 FAM185AQ8N0U4 392 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 LRRC18Q8N456 261 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ADAD2Q8NCV1 583 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SLC30A7Q8NEW0 376 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 OR13G1Q8NGZ3 307 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 FNDC9Q8TBE3 224 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SAT2Q96F10 170 aaPredicted RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 CCDC120Q96HB5 630 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SEC22AQ96IW7 307 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 LYZL4Q96KX0 146 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 Q96M66 194 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF385AQ96PM9 386 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 AQP10Q96PS8 301 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SPACA5Q96QH8 159 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 FOXB1Q99853 325 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 CMSS1Q9BQ75 279 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SUCNR1Q9BXA5 334 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 LINC00470Q9BZP3 86 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 SLC6A15Q9H2J7 730 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 LDAHQ9H6V9 325 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 PLEKHA2Q9HB19 425 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF286AQ9HBT8 521 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF319Q9P2F9 582 aa6.27□□□□□ -1.41
SPIDR-228ENST00000588781 GCN1Q92616 2671 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 TNRC6BQ9UPQ9 1833 aaKnown RBP6.27□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF816-ZNF321PA0A0X1KG74 233 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 C21orf140B9A014 251 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 FGF16O43320 207 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 SYNGR3O43761 229 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 CYTIPO60759 359 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 RAD51DO75771 328 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 TRAPPC6AO75865 159 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 LIPCP11150 499 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 CCL4P13236 92 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 GDF1P27539 372 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 B3GALT5-AS1P59052 145 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PPIAP62937 165 aaKnown RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 MALLQ13021 153 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ATXN7L3Q14CW9 347 aaPredicted RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 SLC9A3R2Q15599 337 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 UBE2V2Q15819 145 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 KRTAP27-1Q3LI81 207 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ABCA11PQ4W5N1 156 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ACER2Q5QJU3 275 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 TMEM164Q5U3C3 297 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ASCL4Q6XD76 172 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PPP1R32Q7Z5V6 425 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 SAXO1Q8IYX7 474 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 OSR2Q8N2R0 312 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ESX1Q8N693 406 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ZIC4Q8N9L1 334 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 POC1AQ8NBT0 407 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 LHFPL5Q8TAF8 219 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PCNPQ8WW12 178 aaKnown RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PIGTQ969N2 578 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 MRGPRFQ96AM1 343 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 SGK3Q96BR1 496 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 WBP1Q96G27 269 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 LINC00052Q96N35 136 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 UCN2Q96RP3 112 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 FAM173AQ9BQD7 235 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 MESP1Q9BRJ9 268 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 GPR87Q9BY21 358 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PRDM14Q9GZV8 571 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 C5orf66Q9H5L9 145 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PROK2Q9HC23 129 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 GPR173Q9NS66 373 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF701Q9NV72 531 aaPredicted RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF230Q9UIE0 474 aaPredicted RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 RALYQ9UKM9 306 aaKnown RBP6.26□□□□□ -1.41
SPIDR-228ENST00000588781 TCFL5Q9UL49 500 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 LOXL2Q9Y4K0 774 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 POMT1Q9Y6A1 747 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 KNL1Q8NG31 2342 aa6.26□□□□□ -1.41
SPIDR-228ENST00000588781 PCNX3Q9H6A9 2034 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 IGKV3D-15A0A087WSY6 115 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 CCDC187A0A096LP49 1063 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 BORCS7-ASMTA0A0B4J1R7 106 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 IGHV3-15A0A0B4J1V0 119 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 FAM230AA0A1W2PPH8 454 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 CRYM-AS1A6NIL9 109 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF716A6NP11 495 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 POM121CA8CG34 1229 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 ZNF850A8MQ14 1090 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 CXCL13O43927 109 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 PDCD6O75340 191 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 JTBO76095 146 aa6.25□□□□□ -1.41
SPIDR-228ENST00000588781 GAPDHP04406 335 aaKnown RBP6.25□□□□□ -1.41
SPIDR-228ENST00000588781 CELA2AP08217 269 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms