RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PP6455Q8WZ26 134 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 YIPF5Q969M3 257 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 FOXRED1Q96CU9 486 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-208ENST00000588667 DIRAS2Q96HU8 199 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 COX4I2Q96KJ9 171 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 REG4Q9BYZ8 158 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 A6NIN4 97 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 VWC2LB2RUY7 222 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 RNF223E7ERA6 249 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 RP2O75695 350 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 CALCBP10092 127 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 TNFRSF1AP19438 455 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 COL8A2P25067 703 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 CD40LGP29965 261 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 BDKRB2P30411 391 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 MAP2K3P46734 347 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 PPP5CP53041 499 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 RIN1Q13671 783 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 ZNF529Q6P280 563 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 FTMTQ8N4E7 242 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 CSNK2A3Q8NEV1 391 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 SEMA6DQ8NFY4 1073 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 OR51A2Q8NGJ7 313 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 ITFG2Q969R8 447 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 OR2V2Q96R30 315 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 PALMDQ9NP74 551 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 SPATA2Q9UM82 520 aa17.04■□□□□ 0.32
ATG4D-208ENST00000588667 ANKRD30BLA7E2S9 258 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 H0YL77 283 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 J3QRK9 145 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SULT1B1O43704 296 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 CDC14BO60729 498 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 PAHP00439 452 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SNRPBP14678 240 aaKnown RBP17.03■□□□□ 0.32
ATG4D-208ENST00000588667 FOSL1P15407 271 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 CA6P23280 308 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 NR4A2P43354 598 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SCAND1P57086 179 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 RIPPLY1Q0D2K3 151 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 OR8G1Q15617 311 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 LRRC28Q86X40 367 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-208ENST00000588667 CIARTQ8N365 385 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SAMD12Q8N8I0 201 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 OR13C9Q8NGT0 318 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 ITLN1Q8WWA0 313 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 C18orf12Q96KH6 178 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 CMTM3Q96MX0 182 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 ADAT1Q9BUB4 502 aaKnown RBP17.03■□□□□ 0.32
ATG4D-208ENST00000588667 BPESC1Q9GZL8 116 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 LIN7BQ9HAP6 207 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 STEAP1Q9UHE8 339 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 PIGLQ9Y2B2 252 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 ABCA1O95477 2261 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 MTORP42345 2549 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SLC17A2O00624 439 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 GMDSO60547 372 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 CD37P11049 281 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 SRP9P49458 86 aaKnown RBP17.03■□□□□ 0.32
ATG4D-208ENST00000588667 RAB11BQ15907 218 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 HFEQ30201 348 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 C16orf87Q6PH81 154 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 MEGF10Q96KG7 1140 aa17.03■□□□□ 0.32
ATG4D-208ENST00000588667 YLPM1P49750 1951 aaKnown RBP17.02■□□□□ 0.32
ATG4D-208ENST00000588667 A0A096LNT2 108 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 FABP12A6NFH5 140 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 FAM25AB3EWG3 89 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 FAM25CB3EWG5 89 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 FAM25GB3EWG6 89 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 F5H5P2 479 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 MAGEB3O15480 346 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 OCMP0CE72 109 aaPredicted RBP17.02■□□□□ 0.31
ATG4D-208ENST00000588667 FAHP16930 419 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 ACKR3P25106 362 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 TALDO1P37837 337 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 TMEM33P57088 247 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 UTS2BQ765I0 119 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 JAGN1Q8N5M9 183 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 CELF2-AS1Q8N7Q2 184 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 OR6M1Q8NGM8 313 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 LGALS14Q8TCE9 139 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 CHST5Q9GZS9 411 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 ETV7Q9Y603 341 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 CACNG2Q9Y698 323 aa17.02■□□□□ 0.31
ATG4D-208ENST00000588667 A0A0B4J203 849 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 ALX3O95076 343 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 APOA1P02647 267 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 CD200P41217 278 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 RANBP1P43487 201 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 CNIH2Q6PI25 160 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 METAP1DQ6UB28 335 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-208ENST00000588667 FAM131AQ6UXB0 335 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 CDH26Q8IXH8 852 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 SPERTQ8NA61 448 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 V9GYH0 126 aa17.01■□□□□ 0.31
ATG4D-208ENST00000588667 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17■□□□□ 0.31
ATG4D-208ENST00000588667 ELK1P19419 428 aa17■□□□□ 0.31
ATG4D-208ENST00000588667 HTR2CP28335 458 aa17■□□□□ 0.31
ATG4D-208ENST00000588667 GPR6P46095 362 aaPredicted RBP17■□□□□ 0.31
ATG4D-208ENST00000588667 CAPZA1P52907 286 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms