RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PGLYRP3Q96LB9 341 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 OR8B2Q96RD0 313 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 DHDHQ9UQ10 334 aa16.84■□□□□ 0.29
DDX39A-207ENST00000588542 LSM2Q9Y333 95 aaKnown RBP16.84■□□□□ 0.29
DDX39A-207ENST00000588542 TRAPPC2LH3BP13 241 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 DENRO43583 198 aaKnown RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 NDUFA2O43678 99 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 FCN3O75636 299 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 PGA5P0DJD9 388 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 AMY2BP19961 511 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 AZGP1P25311 298 aaKnown RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 PITPNBP48739 271 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 TAS2R43P59537 309 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 RBM48Q5RL73 367 aaKnown RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 FAM120AOSQ5T036 256 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 STUMQ69YW2 141 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 ASPHD2Q6ICH7 369 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 POC1AQ8NBT0 407 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 OR13C9Q8NGT0 318 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 GPR148Q8TDV2 347 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 TSEN15Q8WW01 171 aaKnown RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 GHSRQ92847 366 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 C12orf43Q96C57 262 aaKnown RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 BORCS8Q96FH0 119 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 ZNF488Q96MN9 340 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 OR5M11Q96RB7 305 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 MND1Q9BWT6 205 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 SSBP3Q9BWW4 388 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-207ENST00000588542 PKIBQ9C010 78 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 ZCCHC4Q9H5U6 513 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 ZNF281Q9Y2X9 895 aa16.83■□□□□ 0.28
DDX39A-207ENST00000588542 NAV3Q8IVL0 2385 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 ADAM20O43506 726 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 NOS1APO75052 506 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-207ENST00000588542 MT-ND2P03891 347 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 GLRA1P23415 457 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 SOX2P48431 317 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 RPS11P62280 158 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX39A-207ENST00000588542 PAX2Q02962 417 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 IL24Q13007 206 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 WDR25Q64LD2 544 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-207ENST00000588542 CRIP3Q6Q6R5 217 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 IL17RELQ6ZVW7 336 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 NLRC3Q7RTR2 1065 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 RNF144BQ7Z419 303 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 SERPINA12Q8IW75 414 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 OR5T2Q8NGG2 359 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 OR13C5Q8NGS8 318 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 MMP26Q9NRE1 261 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 SNTG1Q9NSN8 517 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 KAAG1Q9UBP8 84 aa16.82■□□□□ 0.28
DDX39A-207ENST00000588542 PPIAL4CA0A0B4J2A2 164 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 TRBV5-5A0A0J9YX44 114 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 PNMA8CA0A1B0GUJ8 204 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 A0A1B0GW55 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 RGS10O43665 173 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 ALX3O95076 343 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 ACAA1P09110 424 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L2P0CJ85 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L3P0CJ86 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L4P0CJ87 422 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L5P0CJ88 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L6P0CJ89 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L7P0CJ90 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 PRKACBP22694 351 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 RBP2P50120 134 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 GNB2P62879 340 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 ACSM1Q08AH1 577 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 ATPAF1Q5TC12 328 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-207ENST00000588542 ZNF529Q6P280 563 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4L9Q6RFH8 374 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-207ENST00000588542 OR5D14Q8NGL3 314 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DACT3Q96B18 629 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-207ENST00000588542 SPSB1Q96BD6 273 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 OPALINQ96PE5 141 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 CCL13Q99616 98 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 NRIP2Q9BQI9 281 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 RASSF4Q9H2L5 321 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 SMURF1Q9HCE7 757 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 NLKQ9UBE8 527 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DNAJB11Q9UBS4 358 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 DUX4Q9UBX2 424 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 CLN8Q9UBY8 286 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 CDC42EP3Q9UKI2 254 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 POLDIP2Q9Y2S7 368 aa16.81■□□□□ 0.28
DDX39A-207ENST00000588542 TFF1P04155 84 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 CD1AP06126 327 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 CELP19835 753 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 ATP1B3P54709 279 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 ERVK11-1P61568 191 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 BDH1Q02338 343 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 ACP7Q6ZNF0 438 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 LHFPL2Q6ZUX7 228 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 PRSS48Q7RTY5 328 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 ANGPTL6Q8NI99 470 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 TMIGD2Q96BF3 282 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 SPACA5Q96QH8 159 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 TMPRSS13Q9BYE2 586 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 Q9H521 79 aa16.8■□□□□ 0.28
DDX39A-207ENST00000588542 HES4Q9HCC6 221 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms