RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	TSPO2	Q5TGU0	170 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	EPGN	Q6UW88	154 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	RTL4	Q6ZR62	310 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	C19orf18	Q8NEA5	215 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	RXFP2	Q8WXD0	754 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	CCDC124	Q96CT7	223 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	CAMK2N2	Q96S95	79 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	TMEM243	Q9BU79	118 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	TOLLIP	Q9H0E2	274 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	C12orf10	Q9HB07	376 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	HMG20A	Q9NP66	347 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	LHX9	Q9NQ69	397 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNHIT6	Q9NWK9	470 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	VAPA	Q9P0L0	249 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	GMEB1	Q9Y692	573 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	BPTF	Q12830	3046 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	XRN1	Q8IZH2	1706 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	REV3L	O60673	3130 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	RIMS2	Q9UQ26	1411 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGKV1-27	A0A075B6S5	117 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009		A0A0U1RQV1	116 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ERICH2	A1L162	156 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009		A8MU10	97 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	TNFRSF11B	O00300	401 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	GCM2	O75603	506 aa	Predicted RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	SLC22A5	O76082	557 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR5AL1	P0C617	328 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	SLC35G6	P0C7Q6	338 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	LIPC	P11150	499 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNF823	P16415	610 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	GALR1	P47211	349 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	CRADD	P78560	199 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	CYP24A1	Q07973	514 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	LCE3C	Q5T5A8	94 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	STEAP4	Q687X5	459 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	FAHD1	Q6P587	224 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	CA13	Q8N1Q1	262 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNF786	Q8N393	782 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR5W2	Q8NH69	310 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	COQ8A	Q8NI60	647 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	RXFP4	Q8TDU9	374 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	RERG	Q96A58	199 aa	Predicted RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	C6orf50	Q9HD87	102 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	DDX19A	Q9NUU7	478 aa	Known RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	RMND1	Q9NWS8	449 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ANAPC11	Q9NYG5	84 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	NXT1	Q9UKK6	140 aa	Known RBP	3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	HES2	Q9Y543	173 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	USP24	Q9UPU5	2620 aa		3.55	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZFYVE26	Q68DK2	2539 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	CCDC144A	A2RUR9	1427 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZFYVE9	O95405	1425 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	NOTCH3	Q9UM47	2321 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	WDFY4	Q6ZS81	3184 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	USP34	Q70CQ2	3546 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	CEP152	O94986	1710 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009		A0A1W2PP18	115 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	IQCF5	A8MTL0	148 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	KRBOX1	C9JBD0	128 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	TAAR5	O14804	337 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	B4GALT5	O43286	388 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	YIF1A	O95070	293 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	TRBV12-3	P01733	135 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	RPN2	P04844	631 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	PGAM1	P18669	254 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	IL12B	P29460	328 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	DNASE1L1	P49184	302 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	PRLHR	P49683	370 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	MNAT1	P51948	309 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	MTPN	P58546	118 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	ESRRG	P62508	458 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	C2orf80	Q0P641	193 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	NTM-AS1	Q6ZSK4	140 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	CALHM1	Q8IU99	346 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	LRRC8A	Q8IWT6	810 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	PGAM4	Q8N0Y7	254 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	PLA2G2F	Q9BZM2	168 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR52A5	Q9H2C5	316 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR52D1	Q9H346	318 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	RBFOX1	Q9NWB1	397 aa	Known RBP	3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	SDHAF2	Q9NX18	166 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	VAX2	Q9UIW0	290 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	ACOT9	Q9Y305	439 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	DCHS1	Q96JQ0	3298 aa		3.54	□□□□□ -1.84
TUBD1-208	ENST00000588009	TRAV8-4	A0A0B4J246	113 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	SPAG7	O75391	227 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009		P01737	135 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	DNAH10OS	P0CZ25	163 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	CXCR1	P25024	350 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	RGS6	P49758	472 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	CDK5	Q00535	292 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	PNOC	Q13519	176 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	ANGPT1	Q15389	498 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	UBE2S	Q16763	222 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	MPV17L2	Q567V2	206 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	FAM78A	Q5JUQ0	283 aa		3.53	□□□□□ -1.84
TUBD1-208	ENST00000588009	TMEM236	Q5W0B7	351 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms