RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RORBQ92753 470 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 SDSLQ96GA7 329 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 IL4I1Q96RQ9 567 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 RBM4BQ9BQ04 359 aaKnown RBP11.71□□□□□ -0.53
VMP1-206ENST00000587945 CADM1Q9BY67 442 aaKnown RBP11.71□□□□□ -0.53
VMP1-206ENST00000587945 ADGRL4Q9HBW9 690 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
VMP1-206ENST00000587945 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 H3BSH0 61 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 M0QZ24 198 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 TIMM23O14925 209 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 PRDX2P32119 198 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 HAAOP46952 286 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 ERVFRD-1P60508 538 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 EFNB1P98172 346 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 ACSM1Q08AH1 577 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 CLVS2Q5SYC1 327 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 BCL2L15Q5TBC7 163 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 ZBTB37Q5TC79 503 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 OR4M1Q8NGD0 313 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 OR14K1Q8NGZ2 314 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 TMEM163Q8TC26 289 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 PPA2Q9H2U2 334 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 KRT84Q9NSB2 600 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 RASL12Q9NYN1 266 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 H2AFY2Q9P0M6 372 aaPredicted RBP11.7□□□□□ -0.54
VMP1-206ENST00000587945 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
VMP1-206ENST00000587945 OR52A1Q9UKL2 312 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 SLC22A13Q9Y226 551 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 SF3B6Q9Y3B4 125 aaKnown RBP11.7□□□□□ -0.54
VMP1-206ENST00000587945 R4GMQ9 66 aa11.7□□□□□ -0.54
VMP1-206ENST00000587945 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ZAR1LA6NP61 321 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 G3V2T6 193 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 J3QT63 122 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 TSPAN9O75954 239 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 RPP14O95059 124 aaKnown RBP11.69□□□□□ -0.54
VMP1-206ENST00000587945 APOL3O95236 402 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 EGR3Q06889 387 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ATP6AP1Q15904 470 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 LY6EQ16553 131 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 OCLNQ16625 522 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ODF4Q2M2E3 257 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 SMIM21Q3B7S5 101 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 C12orf73Q69YU5 71 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 TMEM200BQ69YZ2 307 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 SSX6Q7RTT6 188 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 AMIGO2Q86SJ2 522 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ANGPTL5Q86XS5 388 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ZNF573Q86YE8 665 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ELMOD2Q8IZ81 293 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 OR5D13Q8NGL4 314 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 ITFG2Q969R8 447 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 TBX5Q99593 518 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 PRRG3Q9BZD7 231 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 MMP27Q9H306 513 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 CLN6Q9NWW5 311 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 V9GYS6 101 aa11.69□□□□□ -0.54
VMP1-206ENST00000587945 PQLC2LA1A4F0 135 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 ANKRD61A6NGH8 418 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 H3BUX3 64 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 DLGAP1O14490 977 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 NXPH2O95156 264 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 TSPAN15O95858 294 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 CCL3L1P16619 93 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 COX7A1P24310 79 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 TGFBR2P37173 567 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
VMP1-206ENST00000587945 NXNL2Q5VZ03 156 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 KDM4DQ6B0I6 523 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 OR51G2Q8NGK0 314 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 OR2T27Q8NH04 317 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 PPP1R35Q8TAP8 253 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 UBE2FQ969M7 185 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 SSX3Q99909 188 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 NRIP2Q9BQI9 281 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 MOB1AQ9H8S9 216 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 OR14J1Q9UGF5 321 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 SNX5Q9Y5X3 404 aa11.68□□□□□ -0.54
VMP1-206ENST00000587945 WNK1Q9H4A3 2382 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 SLC1A7O00341 560 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 DYNC1I1O14576 645 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 NOS1APO75052 506 aaPredicted RBP11.67□□□□□ -0.54
VMP1-206ENST00000587945 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
VMP1-206ENST00000587945 POLR2IP36954 125 aaKnown RBP11.67□□□□□ -0.54
VMP1-206ENST00000587945 BMXP51813 675 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms