RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 RGS10O43665 173 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 CYB5R3P00387 301 aaPredicted RBP13.07□□□□□ -0.32
NCLN-203ENST00000587740 SERPINA3P01011 423 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 CRHBPP24387 322 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 TAS2R43P59537 309 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 SLC9A3R2Q15599 337 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 ARMCX4Q5H9R4 360 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 OR1M1Q8NGA1 313 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 OR5A2Q8NGI9 324 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 Q8TCH9 128 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 CDCA4Q9BXL8 241 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 GPR173Q9NS66 373 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 ERVK-18Q9QC07 812 aa13.07□□□□□ -0.32
NCLN-203ENST00000587740 ZNF732B4DXR9 585 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 CLDN34H7C241 214 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 OGG1O15527 345 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 FOXH1O75593 365 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 ZFPL1O95159 310 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 ZNF20P17024 532 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 OMGP23515 440 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 EEF1B2P24534 225 aaKnown RBP13.06□□□□□ -0.32
NCLN-203ENST00000587740 PMELP40967 661 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 GPM6AP51674 278 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 GNG3P63215 75 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 ZNF154Q13106 437 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 TMEM42Q69YG0 159 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 OR10AC1Q8NH08 325 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 SGCDQ92629 289 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 FGGYQ96C11 551 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 C1orf123Q9NWV4 160 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 POLR3KQ9Y2Y1 108 aaPredicted RBP13.06□□□□□ -0.32
NCLN-203ENST00000587740 AUP1Q9Y679 476 aa13.06□□□□□ -0.32
NCLN-203ENST00000587740 hCG_1807616A0A1W2PRN6 198 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 ANKRD61A6NGH8 418 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 OR5B21A6NL26 309 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 GATBO75879 557 aaKnown RBP13.05□□□□□ -0.32
NCLN-203ENST00000587740 LALBAP00709 142 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 SEC61A1P61619 476 aaKnown RBP13.05□□□□□ -0.32
NCLN-203ENST00000587740 BTG1P62324 171 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 FAM76BQ5HYJ3 339 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 DMRTC1Q5HYR2 192 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 PRSS48Q7RTY5 328 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 OR51A4Q8NGJ6 313 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 RPS4Y2Q8TD47 263 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 TSEN15Q8WW01 171 aaKnown RBP13.05□□□□□ -0.32
NCLN-203ENST00000587740 PP6455Q8WZ26 134 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 SLC25A28Q96A46 364 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 SMIM19Q96E16 107 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
NCLN-203ENST00000587740 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
NCLN-203ENST00000587740 IGHV2-70P01814 119 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 MT-ND2P03891 347 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 IRF3Q14653 427 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 DMKNQ6E0U4 476 aaPredicted RBP13.04□□□□□ -0.32
NCLN-203ENST00000587740 ZNF826PQ6ZT77 177 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
NCLN-203ENST00000587740 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 ADAT3Q96EY9 351 aaPredicted RBP13.04□□□□□ -0.32
NCLN-203ENST00000587740 YTHDF1Q9BYJ9 559 aaKnown RBP13.04□□□□□ -0.32
NCLN-203ENST00000587740 CHST5Q9GZS9 411 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 FGF23Q9GZV9 251 aaPredicted RBP13.04□□□□□ -0.32
NCLN-203ENST00000587740 TLNRD1Q9H1K6 362 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 DHDHQ9UQ10 334 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 ZNF281Q9Y2X9 895 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 MMP24Q9Y5R2 645 aa13.04□□□□□ -0.32
NCLN-203ENST00000587740 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 CDIPTO14735 213 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 ZNF205O95201 554 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
NCLN-203ENST00000587740 GABARAPL2P60520 117 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 BDH1Q02338 343 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 ACSM1Q08AH1 577 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 CNN3Q15417 329 aaKnown RBP13.03□□□□□ -0.32
NCLN-203ENST00000587740 SPHARQ15513 63 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 MED22Q15528 200 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 UBE2V2Q15819 145 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 UTS2BQ765I0 119 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 LRRC28Q86X40 367 aaPredicted RBP13.03□□□□□ -0.32
NCLN-203ENST00000587740 SERPINA12Q8IW75 414 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
NCLN-203ENST00000587740 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
NCLN-203ENST00000587740 SCCPDHQ8NBX0 429 aa13.03□□□□□ -0.32
NCLN-203ENST00000587740 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms