RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 AKAIN1P0CW23 69 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 CA6P23280 308 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 RAB25P57735 213 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 TAS2R19P59542 299 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 FAM27E3Q08E93 113 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 SLC25A26Q70HW3 274 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 RTN4RL2Q86UN3 420 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 ZSCAN4Q8NAM6 433 aaPredicted RBP17.02■□□□□ 0.32
TRIM47-204ENST00000587339 ACTR6Q9GZN1 396 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 IGHV2OR16-5A0A0B4J2B6 119 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 GABRR1P24046 479 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 RCVRNP35243 200 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 GNG2P59768 71 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 ALKBH2Q6NS38 261 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 STEAP1BQ6NZ63 245 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 OR4C16Q8NGL9 310 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.31
TRIM47-204ENST00000587339 FAM122AQ96E09 287 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 MRPS24Q96EL2 167 aaKnown RBP17.02■□□□□ 0.31
TRIM47-204ENST00000587339 BCL2L14Q9BZR8 327 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 NPAP1Q9NZP6 1156 aa17.02■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF107Q9UII5 783 aaPredicted RBP17.02■□□□□ 0.31
TRIM47-204ENST00000587339 FOXI3A8MTJ6 420 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-204ENST00000587339 MFNGO00587 321 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 SFTPBP07988 381 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 SELEP16581 610 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 TUBG1P23258 451 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF83P51522 516 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 BTG1P62324 171 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 PPA1Q15181 289 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 BTN2A1Q7KYR7 527 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 OSR2Q8N2R0 312 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 TMEM229BQ8NBD8 167 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 OR4D10Q8NGI6 311 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 MARS2Q96GW9 593 aaKnown RBP17.01■□□□□ 0.31
TRIM47-204ENST00000587339 PRORYQ9H606 182 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 TUBG2Q9NRH3 451 aa17.01■□□□□ 0.31
TRIM47-204ENST00000587339 CACNA1AO00555 2505 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 OR5B21A6NL26 309 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF736B4DX44 427 aaPredicted RBP17■□□□□ 0.31
TRIM47-204ENST00000587339 DHFRP00374 187 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 PSG7Q13046 419 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 ARL6IP1Q15041 203 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 PNLIPRP3Q17RR3 467 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 CHAC2Q8WUX2 184 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 HPS1Q92902 700 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 CALCRP30988 508 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 GNG3P63215 75 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 NAAAQ02083 359 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 TAF9Q16594 264 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF782Q6ZMW2 699 aaPredicted RBP17■□□□□ 0.31
TRIM47-204ENST00000587339 AKAP14Q86UN6 197 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 LIX1LQ8IVB5 337 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 C1orf174Q8IYL3 243 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 GVQW1Q8N7I0 195 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 RND1Q92730 232 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 VKORC1Q9BQB6 163 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 C20orf85Q9H1P6 137 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 IFT46Q9NQC8 304 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17■□□□□ 0.31
TRIM47-204ENST00000587339 ELOVL5Q9NYP7 299 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 ALG5Q9Y673 324 aa17■□□□□ 0.31
TRIM47-204ENST00000587339 IQCF6A8MYZ5 107 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 M0R1B8 84 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 SSX5O60225 188 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 RAB3DO95716 219 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 HLA-DMAP28067 261 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 MPV17P39210 176 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 CASP6P55212 293 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 CD300CQ08708 224 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 ARFRP1Q13795 201 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 SAXO1Q8IYX7 474 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 FBXL14Q8N1E6 418 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 OR56B4Q8NH76 319 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 PECRQ9BY49 303 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 NKIRAS2Q9NYR9 191 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 ST3GAL6Q9Y274 331 aa16.99■□□□□ 0.31
TRIM47-204ENST00000587339 TRGV8A0A0C4DH27 118 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 SERPINE3A8MV23 424 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 H2AFB2P0C5Z0 115 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 SFTPCP11686 197 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 ALKBH6Q3KRA9 238 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 PIGYQ3MUY2 71 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 C3orf36Q3SXR2 165 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 C1QTNF12Q5T7M4 302 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 ZNF573Q86YE8 665 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 RELL2Q8NC24 303 aaPredicted RBP16.98■□□□□ 0.31
TRIM47-204ENST00000587339 OR4S1Q8NGB4 309 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 PLEKHJ1Q9NW61 149 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 AKR7A2O43488 359 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 NPBWR2P48146 333 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 RAG2P55895 527 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 NKAPLQ5M9Q1 402 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 TMEM211Q6ICI0 200 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 C6orf201Q7Z4U5 140 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 TMEM200AQ86VY9 491 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 MKXQ8IYA7 352 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 SLAMF9Q96A28 289 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 RTL8AQ9BWD3 113 aa16.98■□□□□ 0.31
TRIM47-204ENST00000587339 JKAMPQ9P055 326 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms