RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PGLYRP3Q96LB9 341 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 OR51I2Q9H344 312 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 ELL3Q9HB65 397 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM138Q9NPI0 162 aa11.67□□□□□ -0.54
TRAF4-215ENST00000584944 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 TRAPPC2LH3BP13 241 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 LGALS8O00214 317 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 CCRL2O00421 344 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 AKR7A2O43488 359 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 INMTO95050 263 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM225BP0DP42 221 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 RPS2P15880 293 aaKnown RBP11.66□□□□□ -0.54
TRAF4-215ENST00000584944 BDKRB2P30411 391 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 GABRA5P31644 462 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 CD80P33681 288 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-215ENST00000584944 DOC2BQ14184 412 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 ZMYND11Q15326 602 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 SMIM21Q3B7S5 101 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 HSD17B12Q53GQ0 312 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 DDI2Q5TDH0 399 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 UBE2UQ5VVX9 321 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 SLC25A26Q70HW3 274 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 WDR86Q86TI4 376 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 ANGPTL5Q86XS5 388 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 PHC2Q8IXK0 858 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 MAPK1IP1LQ8NDC0 245 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 AQP3Q92482 292 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 MDFIQ99750 246 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 PKIBQ9C010 78 aa11.66□□□□□ -0.54
TRAF4-215ENST00000584944 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 OOEPA6NGQ2 149 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 NKX6-3A6NJ46 265 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 VWC2LB2RUY7 222 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 INAFM1C9JVW0 142 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 NDUFA2O43678 99 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 MAS1P04201 325 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-215ENST00000584944 KISS1Q15726 138 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 FAM76BQ5HYJ3 339 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 Q8IYB0 196 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 JAGN1Q8N5M9 183 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 RFT1Q96AA3 541 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 DERL3Q96Q80 235 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 TLNRD1Q9H1K6 362 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 METTL17Q9H7H0 456 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-215ENST00000584944 ZNF696Q9H7X3 374 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 EXOSC4Q9NPD3 245 aaKnown RBP11.65□□□□□ -0.54
TRAF4-215ENST00000584944 NOX4Q9NPH5 578 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 DCAF16Q9NXF7 216 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 RASL12Q9NYN1 266 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 GLS2Q9UI32 602 aa11.65□□□□□ -0.54
TRAF4-215ENST00000584944 SONP18583 2426 aaKnown RBP11.65□□□□□ -0.55
TRAF4-215ENST00000584944 COL6A5A8TX70 2615 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 MEGF11A6BM72 1044 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 RHBDL1O75783 438 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 ALX3O95076 343 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 IGHV2-70P01814 119 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 ZNF93P35789 620 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-215ENST00000584944 PMELP40967 661 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 GZMKP49863 264 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 RPS25P62851 125 aaKnown RBP11.64□□□□□ -0.55
TRAF4-215ENST00000584944 IL24Q13007 206 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 RSU1Q15404 277 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 ESCO2Q56NI9 601 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 DCDC5Q6ZRR9 648 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 LRRC28Q86X40 367 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-215ENST00000584944 NKAIN3Q8N8D7 197 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 C19orf18Q8NEA5 215 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 OR5D18Q8NGL1 313 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 OR51F2Q8NH61 342 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 CLDND2Q8NHS1 167 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 TNFAIP8L1Q8WVP5 186 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 PHYHIPQ92561 330 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 SPACA5Q96QH8 159 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 ZNF665Q9H7R5 613 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 SMURF1Q9HCE7 757 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 PCDHB16Q9NRJ7 776 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 NDUFB11Q9NX14 153 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 FOXJ3Q9UPW0 622 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 ATRQ13535 2644 aa11.64□□□□□ -0.55
TRAF4-215ENST00000584944 IGHV3OR15-7A0A075B7D8 119 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 IGKV1-9A0A0C4DH69 117 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 SRRM5B3KS81 715 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 ADAM20O43506 726 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 FSTP19883 344 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 PCMT1P22061 227 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 MYL9P24844 172 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 CFHR2P36980 270 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 RANBP1P43487 201 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 GABRA2P47869 451 aa11.63□□□□□ -0.55
TRAF4-215ENST00000584944 RPS11P62280 158 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms