RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CDONQ4KMG0 1287 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 RUSC1-AS1Q66K80 236 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 RDH10Q8IZV5 341 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 POC1AQ8NBT0 407 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 LY6G5BQ8NDX9 201 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 OR2G2Q8NGZ5 317 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 NPRL2Q8WTW4 380 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 LGALS12Q96DT0 336 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 MRPL48Q96GC5 212 aaKnown RBP16.86■□□□□ 0.29
SS18-224ENST00000584083 FAM118AQ9NWS6 357 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 EXOGQ9Y2C4 368 aaKnown RBP16.86■□□□□ 0.29
SS18-224ENST00000584083 KPTNQ9Y664 436 aa16.86■□□□□ 0.29
SS18-224ENST00000584083 IGKV1D-17A0A075B6S4 117 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 CENPVL3A0A0U1RRI6 287 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 MDFIC2A0A1B0GVS7 189 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 LOC107986453A0A1B0GWG9 222 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 TMEM89A2RUT3 159 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 J3QLW9 94 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 SERPINA3P01011 423 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 DBTP11182 482 aaKnown RBP16.85■□□□□ 0.29
SS18-224ENST00000584083 ZNF19P17023 458 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 GABRB1P18505 474 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 ZNF91Q05481 1191 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 ZSCAN26Q16670 478 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 DEFB112Q30KQ8 113 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 SMIM21Q3B7S5 101 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 ACP7Q6ZNF0 438 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 ANGPTL5Q86XS5 388 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 CMTM4Q8IZR5 234 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 RHOXF1Q8NHV9 184 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 GATAD2BQ8WXI9 593 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 SLC25A28Q96A46 364 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 C1orf147Q96MC9 270 aaPredicted RBP16.85■□□□□ 0.29
SS18-224ENST00000584083 DCTN5Q9BTE1 182 aa16.85■□□□□ 0.29
SS18-224ENST00000584083 ZMAT3Q9HA38 289 aaKnown RBP16.85■□□□□ 0.29
SS18-224ENST00000584083 IGHV1-69DA0A0B4J2H0 117 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 GATBO75879 557 aaKnown RBP16.84■□□□□ 0.29
SS18-224ENST00000584083 NXPH2O95156 264 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 IGHV1-69P01742 117 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 HTR1AP08908 422 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 PGA5P0DJD9 388 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 CAPZA1P52907 286 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 ACTA2P62736 377 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 ACTG2P63267 376 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 UBE2V2Q15819 145 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 TMEM244Q5VVB8 128 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 LHFPL3Q86UP9 236 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 BATF2Q8N1L9 274 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 ZNRF1Q8ND25 227 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 ZNF555Q8NEP9 628 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 TMEM185AQ8NFB2 350 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 RNF166Q96A37 237 aaPredicted RBP16.84■□□□□ 0.29
SS18-224ENST00000584083 MYCBPQ99417 103 aaPredicted RBP16.84■□□□□ 0.29
SS18-224ENST00000584083 AMBNQ9NP70 447 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 FRRS1LQ9P0K9 344 aa16.84■□□□□ 0.29
SS18-224ENST00000584083 A0A1W2PQ09 198 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 RFPL4AA6NLU0 287 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 RFPL4AL1F8VTS6 287 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 CAV3P56539 151 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 SLC9A3R2Q15599 337 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 VMO1Q7Z5L0 202 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 CALHM1Q8IU99 346 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 PDZD9Q8IXQ8 264 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 C10orf35Q96D05 121 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 C4orf36Q96KX1 117 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 DMRTB1Q96MA1 342 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 CHST5Q9GZS9 411 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 ELL3Q9HB65 397 aaPredicted RBP16.83■□□□□ 0.28
SS18-224ENST00000584083 SMPD3Q9NY59 655 aaPredicted RBP16.83■□□□□ 0.28
SS18-224ENST00000584083 ZNF222Q9UK12 451 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 MAB21L2Q9Y586 359 aa16.83■□□□□ 0.28
SS18-224ENST00000584083 NOS1APO75052 506 aaPredicted RBP16.82■□□□□ 0.28
SS18-224ENST00000584083 FADS2O95864 444 aaKnown RBP16.82■□□□□ 0.28
SS18-224ENST00000584083 MPZP25189 248 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 PRDX2P32119 198 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 FUT6P51993 359 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 NANOS3P60323 173 aaKnown RBP16.82■□□□□ 0.28
SS18-224ENST00000584083 GALEQ14376 348 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 LRRC36Q1X8D7 754 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 KIR3DL3Q8N743 410 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 C8orf46Q8TAG6 207 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 PELI1Q96FA3 418 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 SDSLQ96GA7 329 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 NRIP2Q9BQI9 281 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 ALG8Q9BVK2 526 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 PKIBQ9C010 78 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 MYRFQ9Y2G1 1151 aa16.82■□□□□ 0.28
SS18-224ENST00000584083 CLDN34H7C241 214 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 SLC1A7O00341 560 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 HOXA3O43365 443 aaPredicted RBP16.81■□□□□ 0.28
SS18-224ENST00000584083 ISG15P05161 165 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 RNASE1P07998 156 aaKnown RBP16.81■□□□□ 0.28
SS18-224ENST00000584083 ZNF20P17024 532 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 IL24Q13007 206 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 CNN3Q15417 329 aaKnown RBP16.81■□□□□ 0.28
SS18-224ENST00000584083 CD177Q8N6Q3 437 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 C3orf56Q8N813 242 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 PP6455Q8WZ26 134 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 FGGYQ96C11 551 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms